RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 GINM1Q9NU53 330 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
TUBE1-210ENST00000604967 DOCK3Q8IZD9 2030 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 PLXNB2O15031 1838 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 MYCP01106 439 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-210ENST00000604967 VCAM1P19320 739 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 PDE4AP27815 886 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 NUCB1Q02818 461 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 MTFR1Q15390 333 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 PLEKHM2Q8IWE5 1019 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 GPATCH3Q96I76 525 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 RLFQ13129 1914 aa12.84□□□□□ -0.35
TUBE1-210ENST00000604967 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-210ENST00000604967 C19orf81C9J6K1 198 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
TUBE1-210ENST00000604967 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
TUBE1-210ENST00000604967 HERVK_113P62684 666 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 FAM110CQ1W6H9 321 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 SBK1Q52WX2 424 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 STK11IPQ8N1F8 1099 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.36
TUBE1-210ENST00000604967 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 GJD2Q9UKL4 321 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 MYPNQ86TC9 1320 aa12.83□□□□□ -0.36
TUBE1-210ENST00000604967 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
TUBE1-210ENST00000604967 RASA1P20936 1047 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 FLT3LGP49771 235 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
TUBE1-210ENST00000604967 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 PORCNQ9H237 461 aa12.82□□□□□ -0.36
TUBE1-210ENST00000604967 KIAA0100Q14667 2235 aaKnown RBP12.82□□□□□ -0.36
TUBE1-210ENST00000604967 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
TUBE1-210ENST00000604967 ERC2O15083 957 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-210ENST00000604967 ELNP15502 786 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 FCGRTP55899 365 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 TRIM32Q13049 653 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 AAMPQ13685 434 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 SLC9C1Q4G0N8 1177 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-210ENST00000604967 IFNL3Q8IZI9 196 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-210ENST00000604967 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-210ENST00000604967 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
TUBE1-210ENST00000604967 IGKV6D-41A0A0C4DH26 115 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
TUBE1-210ENST00000604967 MINDY4BA8MYZ0 360 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
TUBE1-210ENST00000604967 PRDM1O75626 825 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 GNRH1P01148 92 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
TUBE1-210ENST00000604967 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
TUBE1-210ENST00000604967 KIF22Q14807 665 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 SPICE1Q8N0Z3 855 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 FEZ1Q99689 392 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
TUBE1-210ENST00000604967 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
TUBE1-210ENST00000604967 GRK4P32298 578 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-210ENST00000604967 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-210ENST00000604967 USP6NLQ92738 828 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 IL25Q9H293 177 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-210ENST00000604967 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 A0A0G2JMZ2 1700 aa12.79□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 PRMT2P55345 433 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 ERVK-24P63145 666 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 ICA1Q05084 483 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
TUBE1-210ENST00000604967 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms