RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 A0A1W2PQ27 194 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 A0A1W2PQ64 194 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 A0A1W2PQD8 194 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
LINC01235-201ENST00000604724 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 PLCG2P16885 1265 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
LINC01235-201ENST00000604724 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
LINC01235-201ENST00000604724 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
LINC01235-201ENST00000604724 TRIM44Q96DX7 344 aaPredicted RBP12.53□□□□□ -0.4
LINC01235-201ENST00000604724 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
LINC01235-201ENST00000604724 UTRNP46939 3433 aa12.52□□□□□ -0.4
LINC01235-201ENST00000604724 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
LINC01235-201ENST00000604724 PICALMQ13492 652 aa12.52□□□□□ -0.41
LINC01235-201ENST00000604724 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
LINC01235-201ENST00000604724 PNMA1Q8ND90 353 aa12.52□□□□□ -0.41
LINC01235-201ENST00000604724 ERCC4Q92889 916 aaPredicted RBP12.52□□□□□ -0.41
LINC01235-201ENST00000604724 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
LINC01235-201ENST00000604724 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
LINC01235-201ENST00000604724 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
LINC01235-201ENST00000604724 CDK8P49336 464 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 STYK1Q6J9G0 422 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 DDX4Q9NQI0 724 aaKnown RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 A0A087WWV3 80 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 G3V3G9 751 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 EARS2Q5JPH6 523 aaKnown RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
LINC01235-201ENST00000604724 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
LINC01235-201ENST00000604724 UVSSAQ2YD98 709 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 EYA3Q99504 573 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 PCDHAC2Q9Y5I4 1007 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 AP5Z1O43299 807 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 PFKFB1P16118 471 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 NPY5RQ15761 445 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
LINC01235-201ENST00000604724 PPP6R2O75170 966 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 SLC35G1Q2M3R5 365 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
LINC01235-201ENST00000604724 SHC4Q6S5L8 630 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 PODNQ7Z5L7 613 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 LUZP1Q86V48 1076 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 TMEM47Q9BQJ4 181 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 MAD2L2Q9UI95 211 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 ADAMTS3O15072 1205 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 ECE2O60344 883 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 CMA1P23946 247 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 APOBEC3HQ6NTF7 200 aaKnown RBP12.49□□□□□ -0.41
LINC01235-201ENST00000604724 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.49□□□□□ -0.41
LINC01235-201ENST00000604724 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
LINC01235-201ENST00000604724 WNT7AO00755 349 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 XBP1P17861 261 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 NT5C2P49902 561 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 GRIN1Q05586 938 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 AOC3Q16853 763 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CDC42EP5Q6NZY7 148 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 ESPNB1AK53 854 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CTAGE5O15320 804 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 ZNF202O95125 648 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 SLURP2P0DP57 97 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 SCG2P13521 617 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 KIF5BP33176 963 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 KRT2P35908 639 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 GABPAQ06546 454 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 NFIAQ12857 509 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 GRM4Q14833 912 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 PFKFB3Q16875 520 aaPredicted RBP12.48□□□□□ -0.41
LINC01235-201ENST00000604724 DACT2Q5SW24 774 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms