RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 NCAPHQ15003 741 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 KARSQ15046 597 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 BEND6Q5SZJ8 279 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 ZNF589Q86UQ0 364 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 KIFC2Q96AC6 838 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 FAM204AQ9H8W3 233 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 GPSM3Q9Y4H4 160 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 TAF6LQ9Y6J9 622 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 DIP2CQ9Y2E4 1556 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CARMIL3Q8ND23 1372 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 AGLP35573 1532 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 SPTLC2O15270 562 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CUTAO60888 179 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 PHACTR2O75167 634 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 ERLIN2O94905 339 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 ZNF202O95125 648 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 YEATS4O95619 227 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 EIF2S2P20042 333 aaKnown RBP7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 MAP2K2P36507 400 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 MNAT1P51948 309 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CCT2P78371 535 aaKnown RBP7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 GOLGA8FQ08AF8 430 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 GOLGA8DPQ0D2H9 430 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CBLBQ13191 982 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CASP8Q14790 479 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 TAF7Q15545 349 aaPredicted RBP7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 ISM2Q6H9L7 571 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CYB5RLQ6IPT4 315 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 FOXR1Q6PIV2 292 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 SYNE3Q6ZMZ3 975 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CTCFLQ8NI51 663 aaPredicted RBP7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 ZNF622Q969S3 477 aaKnown RBP eCLIP7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CEP89Q96ST8 783 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 LRRC2Q9BYS8 371 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 BABAM1Q9NWV8 329 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 AKAP2Q9Y2D5 859 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 CEP83Q9Y592 693 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 FLT4P35916 1363 aa7.34□□□□□ -1.23
SRGAP2-211ENST00000604423 ZBBXA8MT70 800 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 MTX1Q13505 466 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 SCARF1Q14162 830 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 KIF4BQ2VIQ3 1234 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 NBPF20Q3BBV1 942 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 MAP9Q49MG5 647 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 BEND3Q5T5X7 828 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 LRRC31Q6UY01 552 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 TOGARAM2Q6ZUX3 1019 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 MSANTD4Q8NCY6 345 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 DPF2Q92785 391 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 SMARCC1Q92922 1105 aaPredicted RBP7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 CCDC8Q9H0W5 538 aaPredicted RBP7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 CXorf56Q9H5V9 222 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 TMPRSS4Q9NRS4 437 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 CDC23Q9UJX2 597 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 RAB21Q9UL25 225 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.24
SRGAP2-211ENST00000604423 SBNO1A3KN83 1393 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 KDRP35968 1356 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 NCAPD2Q15021 1401 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 CTAGE15A4D2H0 777 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 CTAGE9A4FU28 777 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 TMEM232C9JQI7 657 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 ANKRD65E5RJM6 399 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 N4BP1O75113 896 aaKnown RBP7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 TAF5LO75529 589 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 RHOXF2BP0C7M4 288 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 CTAGE8P0CG41 777 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 BMP2P12643 396 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 PFKFB1P16118 471 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 MCM3P25205 808 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 SYKP43405 635 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 PIP4K2BP78356 416 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 SPECC1LQ69YQ0 1117 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 CTAGE6Q86UF2 777 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 TMEM139Q8IV31 216 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 CTAGE4Q8IX94 777 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 LINC00528Q8N1L1 170 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 LINC00301Q8NCQ3 95 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 RHOXF2Q9BQY4 288 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 DESI2Q9BSY9 194 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 PLEKHA4Q9H4M7 779 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 ANKZF1Q9H8Y5 726 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 LZTFL1Q9NQ48 299 aa7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 HOOK1Q9UJC3 728 aaKnown RBP7.33□□□□□ -1.24
SRGAP2-211ENST00000604423 AMPHP49418 695 aa7.32□□□□□ -1.24
SRGAP2-211ENST00000604423 WWC2Q6AWC2 1192 aa7.32□□□□□ -1.24
SRGAP2-211ENST00000604423 DHX32Q7L7V1 743 aaKnown RBP7.32□□□□□ -1.24
SRGAP2-211ENST00000604423 BRAPQ7Z569 592 aa7.32□□□□□ -1.24
SRGAP2-211ENST00000604423 JMYQ8N9B5 988 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms