RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 AKNAD1Q5T1N1 836 aa23.38■■□□□ 1.33
SH3D19-211ENST00000604030 HHATQ5VTY9 493 aa23.38■■□□□ 1.33
SH3D19-211ENST00000604030 P3H4Q92791 437 aa23.38■■□□□ 1.33
SH3D19-211ENST00000604030 H7C1D1 291 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 RNF40O75150 1001 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 TRIM37O94972 964 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 GALNT17Q6IS24 598 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 LRRC8AQ8IWT6 810 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 TMEM87AQ8NBN3 555 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 SLC52A2Q9HAB3 445 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 BCAP29Q9UHQ4 241 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 CLNS1AP54105 237 aaKnown RBP23.37■■□□□ 1.33
SH3D19-211ENST00000604030 ADAMTS12P58397 1594 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 GSPT1P15170 499 aaKnown RBP23.37■■□□□ 1.33
SH3D19-211ENST00000604030 SLC8A3P57103 927 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 VPS52Q8N1B4 723 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 FAM71BQ8TC56 605 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 DENND2CQ68D51 928 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 ARHGEF10LQ9HCE6 1279 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 PPP2R2CQ9Y2T4 447 aa23.37■■□□□ 1.33
SH3D19-211ENST00000604030 NOSTRINQ8IVI9 506 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 SMC1BQ8NDV3 1235 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 TDRD7Q8NHU6 1098 aaKnown RBP23.36■■□□□ 1.33
SH3D19-211ENST00000604030 IWS1Q96ST2 819 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 MYO1AQ9UBC5 1043 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 BACH1O14867 736 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 CALCRLQ16602 461 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 OTUD7BQ6GQQ9 843 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 ZNF354CQ86Y25 554 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 MAGEF1Q9HAY2 307 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 STAP2Q9UGK3 403 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 SERTAD1Q9UHV2 236 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 KIF3CO14782 793 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 HOMER3Q9NSC5 361 aa23.36■■□□□ 1.33
SH3D19-211ENST00000604030 KRT71Q3SY84 523 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 OSBPL3Q9H4L5 887 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 AMFRQ9UKV5 643 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 KDRP35968 1356 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 E7EVH7 732 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 RABGGTAQ92696 567 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 FAM89AQ96GI7 184 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 SPATA5Q8NB90 893 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 ODF2LQ9ULJ1 636 aa23.35■■□□□ 1.33
SH3D19-211ENST00000604030 ZMYM6O95789 1325 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
SH3D19-211ENST00000604030 GKAP1Q5VSY0 366 aaPredicted RBP23.34■■□□□ 1.33
SH3D19-211ENST00000604030 ARPP21Q9UBL0 812 aaPredicted RBP23.34■■□□□ 1.33
SH3D19-211ENST00000604030 MAPK8IP1Q9UQF2 711 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 I3L4J1 428 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 ITIH3Q06033 890 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 CCDC38Q502W7 563 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 KLHL7Q8IXQ5 586 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 KCNJ18B7U540 433 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 STRN3Q13033 797 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 KCNJ12Q14500 433 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 PCP11498 1178 aaKnown RBP23.34■■□□□ 1.33
SH3D19-211ENST00000604030 BEND3Q5T5X7 828 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 FAM212AQ96EL1 285 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 ERBB4Q15303 1308 aa23.34■■□□□ 1.33
SH3D19-211ENST00000604030 RBM26Q5T8P6 1007 aaKnown RBP23.33■■□□□ 1.33
SH3D19-211ENST00000604030 SPATA1Q5VX52 437 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 GOLGA5Q8TBA6 731 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 MRPS9P82933 396 aaKnown RBP23.33■■□□□ 1.33
SH3D19-211ENST00000604030 PLS1Q14651 629 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 CDAN1Q8IWY9 1227 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 PHKBQ93100 1093 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 PNOCQ13519 176 aa23.33■■□□□ 1.33
SH3D19-211ENST00000604030 KDM5AP29375 1690 aaKnown RBP23.33■■□□□ 1.32
SH3D19-211ENST00000604030 GTPBP6O43824 516 aaPredicted RBP23.33■■□□□ 1.32
SH3D19-211ENST00000604030 IRX4P78413 519 aa23.33■■□□□ 1.32
SH3D19-211ENST00000604030 CCDC105Q8IYK2 499 aa23.33■■□□□ 1.32
SH3D19-211ENST00000604030 DDX41Q9UJV9 622 aaKnown RBP23.33■■□□□ 1.32
SH3D19-211ENST00000604030 REXO1Q8N1G1 1221 aaKnown RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 USP28Q96RU2 1077 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 GPCPD1Q9NPB8 672 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 HOXA7P31268 230 aaPredicted RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 UAP1Q16222 522 aaPredicted RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 RAB3IPQ96QF0 476 aaPredicted RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 MORC3Q14149 939 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 ZNF215Q9UL58 517 aaPredicted RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 NR1I2O75469 434 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 MAP3K21Q5TCX8 1036 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 TRMT2AQ8IZ69 625 aaKnown RBP23.32■■□□□ 1.32
SH3D19-211ENST00000604030 GRK7Q8WTQ7 553 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 KIFC2Q96AC6 838 aa23.32■■□□□ 1.32
SH3D19-211ENST00000604030 TRPC3Q13507 836 aa23.31■■□□□ 1.32
SH3D19-211ENST00000604030 RRAGAQ7L523 313 aa23.31■■□□□ 1.32
SH3D19-211ENST00000604030 ZNF654Q8IZM8 581 aa23.31■■□□□ 1.32
SH3D19-211ENST00000604030 ATP8A2Q9NTI2 1148 aa23.31■■□□□ 1.32
SH3D19-211ENST00000604030 CASQ2O14958 399 aaPredicted RBP23.31■■□□□ 1.32
SH3D19-211ENST00000604030 RGS16O15492 202 aaPredicted RBP23.31■■□□□ 1.32
SH3D19-211ENST00000604030 EXOC3O60645 756 aa23.31■■□□□ 1.32
SH3D19-211ENST00000604030 N4BP1O75113 896 aaKnown RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 RTEL1Q9NZ71 1219 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 IKBKBO14920 756 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
SH3D19-211ENST00000604030 GPT2Q8TD30 523 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
SH3D19-211ENST00000604030 RUNDC3BQ96NL0 473 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms