RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 GCNT3O95395 438 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 BSPRYQ5W0U4 402 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 GNGT1P63211 74 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 RRAGAQ7L523 313 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 C14orf93Q9H972 538 aaKnown RBP10.61□□□□□ -0.71
CSMD1-217ENST00000602723 SAP30BPQ9UHR5 308 aaKnown RBP10.61□□□□□ -0.71
CSMD1-217ENST00000602723 RPS6KA2Q15349 733 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 DIXDC1Q155Q3 683 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 MIER3Q7Z3K6 550 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 XAB2Q9HCS7 855 aaKnown RBP10.61□□□□□ -0.71
CSMD1-217ENST00000602723 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 SNCBQ16143 134 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 MAGEA1P43355 309 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 CCDC13Q8IYE1 715 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 TTLL3Q9Y4R7 772 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 GADD45BO75293 160 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-217ENST00000602723 ANKRD42Q8N9B4 389 aa10.61□□□□□ -0.71
CSMD1-217ENST00000602723 FLT4P35916 1363 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 PIK3C2GO75747 1445 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 GOLGA8KD6RF30 607 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 HELBQ8NG08 1087 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 FAM207AQ9NSI2 230 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 KRIT1O00522 736 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 ANKRD12Q6UB98 2062 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 TRIM58Q8NG06 486 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 CAPS2Q9BXY5 557 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 HOMER3Q9NSC5 361 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 CLTAP09496 248 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 IDI1Q13907 227 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 LRCH2Q5VUJ6 765 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 WDR7Q9Y4E6 1490 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 WDR46O15213 610 aaKnown RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 PLEKHA4Q9H4M7 779 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 SUDS3Q9H7L9 328 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 PLCH2O75038 1416 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 CCDC51Q96ER9 411 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
CSMD1-217ENST00000602723 MAN1A1P33908 653 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 DBN1Q16643 649 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 DESI2Q9BSY9 194 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
CSMD1-217ENST00000602723 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 PHKBQ93100 1093 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 KCNJ18B7U540 433 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 THAP12O43422 761 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 KCNJ12Q14500 433 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 HMGB1P1B2RPK0 211 aaPredicted RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 BAG2O95816 211 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 ADKP55263 362 aaKnown RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 MYCT1Q8N699 235 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 GOLGA5Q8TBA6 731 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 RIC8AQ9NPQ8 531 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 TRPM2O94759 1503 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 PNOCQ13519 176 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 LONRF2Q1L5Z9 754 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 ARHGEF10LQ9HCE6 1279 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 ADCY7P51828 1080 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 CTAGE3PQ8IX95 158 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 NOP56O00567 594 aaKnown RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 TEX11Q8IYF3 940 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 LIG3P49916 1009 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 NCAPH2Q6IBW4 605 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 NSMCE1Q8WV22 266 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 GNA14O95837 355 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 EXOC3O60645 756 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 SMIM24O75264 130 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 NXNQ6DKJ4 435 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 LRRC43Q8N309 656 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 MAIP1Q8WWC4 291 aa10.59□□□□□ -0.71
CSMD1-217ENST00000602723 DACT3Q96B18 629 aaPredicted RBP10.59□□□□□ -0.71
CSMD1-217ENST00000602723 IFNB1P01574 187 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 TRMT44Q8IYL2 757 aaKnown RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 REXO1Q8N1G1 1221 aaKnown RBP10.58□□□□□ -0.72
CSMD1-217ENST00000602723 NACA2Q9H009 215 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
CSMD1-217ENST00000602723 KRT81Q14533 505 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms