RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 C12orf42Q96LP6 360 aa19.18■□□□□ 0.66
SFXN2-208ENST00000602660 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
SFXN2-208ENST00000602660 SRRDQ9UH36 339 aa19.18■□□□□ 0.66
SFXN2-208ENST00000602660 SWAP70Q9UH65 585 aa19.18■□□□□ 0.66
SFXN2-208ENST00000602660 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
SFXN2-208ENST00000602660 CDK8P49336 464 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 KIAA1683Q9H0B3 1180 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 TMOD4Q9NZQ9 345 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 ROBO3Q96MS0 1386 aa19.17■□□□□ 0.66
SFXN2-208ENST00000602660 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 AKR1B1P15121 316 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 NUCB1Q02818 461 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 PABPC4Q13310 644 aaKnown RBP eCLIP19.16■□□□□ 0.66
SFXN2-208ENST00000602660 SBK1Q52WX2 424 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 CLEC10AQ8IUN9 316 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 SIAH1Q8IUQ4 282 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 ZNF333Q96JL9 665 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 CABP5Q9NP86 173 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 ARPP21Q9UBL0 812 aaPredicted RBP19.16■□□□□ 0.66
SFXN2-208ENST00000602660 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
SFXN2-208ENST00000602660 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 FOXP2O15409 715 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 PEX10O60683 326 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 GCLCP48506 637 aaPredicted RBP19.15■□□□□ 0.66
SFXN2-208ENST00000602660 PRMT2P55345 433 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 ZYXQ15942 572 aaKnown RBP19.15■□□□□ 0.66
SFXN2-208ENST00000602660 P2RX7Q99572 595 aaKnown RBP19.15■□□□□ 0.66
SFXN2-208ENST00000602660 TXNRD2Q9NNW7 524 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
SFXN2-208ENST00000602660 GABRQQ9UN88 632 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 FRMPD3Q5JV73 1810 aa19.15■□□□□ 0.66
SFXN2-208ENST00000602660 FMNL1O95466 1100 aaPredicted RBP19.14■□□□□ 0.65
SFXN2-208ENST00000602660 FCGRTP55899 365 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 HERVK_113P62684 666 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
SFXN2-208ENST00000602660 PRKCZQ05513 592 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 TMEM179Q6ZVK1 233 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 CHD1LQ86WJ1 897 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 EVI5LQ96CN4 794 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 MORF4L1Q9UBU8 362 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 MYPNQ86TC9 1320 aa19.14■□□□□ 0.65
SFXN2-208ENST00000602660 CEP290O15078 2479 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 MPHOSPH10O00566 681 aaKnown RBP19.13■□□□□ 0.65
SFXN2-208ENST00000602660 VCAM1P19320 739 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 IRX3P78415 501 aaPredicted RBP19.13■□□□□ 0.65
SFXN2-208ENST00000602660 LRRFIP1Q32MZ4 808 aaKnown RBP19.13■□□□□ 0.65
SFXN2-208ENST00000602660 SLC9C1Q4G0N8 1177 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 KIAA1755Q5JYT7 1200 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 SH3TC2Q8TF17 1288 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 FEZ1Q99689 392 aa19.13■□□□□ 0.65
SFXN2-208ENST00000602660 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
SFXN2-208ENST00000602660 GNAT2P19087 354 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 USP14P54578 494 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 MLLT1Q03111 559 aaPredicted RBP19.12■□□□□ 0.65
SFXN2-208ENST00000602660 CCDC129Q6ZRS4 1044 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 CCDC17Q96LX7 622 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
SFXN2-208ENST00000602660 PATL2C9JE40 543 aaKnown RBP19.11■□□□□ 0.65
SFXN2-208ENST00000602660 RASA1P20936 1047 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 HOXD10P28358 340 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 CATSPERGQ6ZRH7 1159 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 ALPK3Q96L96 1907 aa19.11■□□□□ 0.65
SFXN2-208ENST00000602660 ZNF236Q9UL36 1845 aa19.1■□□□□ 0.65
SFXN2-208ENST00000602660 MINDY4BA8MYZ0 360 aa19.1■□□□□ 0.65
SFXN2-208ENST00000602660 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
SFXN2-208ENST00000602660 FLT3LGP49771 235 aa19.1■□□□□ 0.65
SFXN2-208ENST00000602660 Q3C1V9 767 aa19.1■□□□□ 0.65
SFXN2-208ENST00000602660 MCM3APO60318 1980 aa19.1■□□□□ 0.65
SFXN2-208ENST00000602660 A0A0D9SFI3 127 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 CNMDO75829 334 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 ICA1Q05084 483 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 VPS53Q5VIR6 699 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 STK11IPQ8N1F8 1099 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 RAET1EQ8TD07 263 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 FAM227BQ96M60 508 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 RPAP3Q9H6T3 665 aaPredicted RBP19.09■□□□□ 0.65
SFXN2-208ENST00000602660 TMX2Q9Y320 296 aa19.09■□□□□ 0.65
SFXN2-208ENST00000602660 SPDYE16A6NNV3 312 aaPredicted RBP19.08■□□□□ 0.64
SFXN2-208ENST00000602660 GRK4P32298 578 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms