RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 PITPNM2Q9BZ72 1349 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 GOLGA8AA7E2F4 631 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
DDX49-213ENST00000602113 JAK2O60674 1132 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 GDF11O95390 407 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 CDC27P30260 824 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 STX8Q9UNK0 236 aa20.44■□□□□ 0.86
DDX49-213ENST00000602113 GREB1LQ9C091 1923 aaPredicted RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 ADD1P35611 737 aaKnown RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 RCAN1P53805 252 aa20.43■□□□□ 0.86
DDX49-213ENST00000602113 TROAPQ12815 778 aa20.43■□□□□ 0.86
DDX49-213ENST00000602113 NBPF12Q5TAG4 269 aaPredicted RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 USP50Q70EL3 339 aaPredicted RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 NSUN7Q8NE18 718 aaKnown RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
DDX49-213ENST00000602113 KAT14Q9H8E8 782 aa20.43■□□□□ 0.86
DDX49-213ENST00000602113 GJB2P29033 226 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 GUCY1A2P33402 732 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 ABCB5Q2M3G0 1257 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 NUP133Q8WUM0 1156 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 TAF1DQ9H5J8 278 aaPredicted RBP20.42■□□□□ 0.86
DDX49-213ENST00000602113 WDR90Q96KV7 1748 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 DDAH1O94760 285 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 FANCBQ8NB91 859 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 PNMA1Q8ND90 353 aa20.42■□□□□ 0.86
DDX49-213ENST00000602113 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
DDX49-213ENST00000602113 GH2P01242 217 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
DDX49-213ENST00000602113 SEPT2Q15019 361 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 RTN1Q16799 776 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 TMEM179Q6ZVK1 233 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 CHMP5Q9NZZ3 219 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 CIZ1Q9ULV3 898 aaPredicted RBP20.41■□□□□ 0.86
DDX49-213ENST00000602113 PPP2R3BQ9Y5P8 575 aa20.41■□□□□ 0.86
DDX49-213ENST00000602113 PTPDC1A2A3K4 754 aa20.4■□□□□ 0.86
DDX49-213ENST00000602113 PHF20L1A8MW92 1017 aa20.4■□□□□ 0.86
DDX49-213ENST00000602113 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
DDX49-213ENST00000602113 DCPSQ96C86 337 aaKnown RBP20.4■□□□□ 0.86
DDX49-213ENST00000602113 CHMP4CQ96CF2 233 aa20.4■□□□□ 0.86
DDX49-213ENST00000602113 SCN4AP35499 1836 aa20.4■□□□□ 0.86
DDX49-213ENST00000602113 TTLL1O95922 423 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 CALM1P0DP23 149 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 CALM2P0DP24 149 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 CALM3P0DP25 149 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 NTRK3Q16288 839 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 DLK2Q6UY11 383 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 SIAH1Q8IUQ4 282 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 DDX11Q96FC9 970 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 KANSL2Q9H9L4 492 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 CLIP2Q9UDT6 1046 aa20.39■□□□□ 0.86
DDX49-213ENST00000602113 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 CPLX1O14810 134 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 PKP1Q13835 747 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 ZC3H15Q8WU90 426 aaKnown RBP20.38■□□□□ 0.85
DDX49-213ENST00000602113 SSC5DA1L4H1 1573 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 FDPSP14324 419 aaKnown RBP20.38■□□□□ 0.85
DDX49-213ENST00000602113 CAP2P40123 477 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 LRRC47Q8N1G4 583 aaKnown RBP20.38■□□□□ 0.85
DDX49-213ENST00000602113 CABP5Q9NP86 173 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 NYAP2Q9P242 653 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 ZBTB21Q9ULJ3 1066 aa20.38■□□□□ 0.85
DDX49-213ENST00000602113 EEF2P13639 858 aaKnown RBP20.37■□□□□ 0.85
DDX49-213ENST00000602113 RAB3GAP1Q15042 981 aa20.37■□□□□ 0.85
DDX49-213ENST00000602113 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
DDX49-213ENST00000602113 EAPPQ56P03 285 aaPredicted RBP20.37■□□□□ 0.85
DDX49-213ENST00000602113 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
DDX49-213ENST00000602113 SULF1Q8IWU6 871 aa20.37■□□□□ 0.85
DDX49-213ENST00000602113 CMTR1Q8N1G2 835 aaKnown RBP20.37■□□□□ 0.85
DDX49-213ENST00000602113 POLR2AP24928 1970 aaKnown RBP20.37■□□□□ 0.85
DDX49-213ENST00000602113 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 HMGN5P82970 282 aaKnown RBP20.36■□□□□ 0.85
DDX49-213ENST00000602113 ATP2B2Q01814 1243 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 ICA1Q05084 483 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 GRM4Q14833 912 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 KRT26Q7Z3Y9 468 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 MKL1Q969V6 931 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 MAP3K14Q99558 947 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.36■□□□□ 0.85
DDX49-213ENST00000602113 MTMR7Q9Y216 660 aa20.36■□□□□ 0.85
DDX49-213ENST00000602113 PLEKHA8P1O95397 391 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 IFNAR1P17181 557 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 SYT1P21579 422 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 FUT2Q10981 343 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
DDX49-213ENST00000602113 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
DDX49-213ENST00000602113 PHKBQ93100 1093 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 HOOK2Q96ED9 719 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 RBM28Q9NW13 759 aaKnown RBP20.35■□□□□ 0.85
DDX49-213ENST00000602113 ZDHHC9Q9Y397 364 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 CDKL5O76039 1030 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 SUPT20HL1Q3ZLR7 823 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms