RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 RAB3GAP1Q15042 981 aa20.97■□□□□ 0.95
IRF3-230ENST00000601809 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
IRF3-230ENST00000601809 CABP5Q9NP86 173 aa20.97■□□□□ 0.95
IRF3-230ENST00000601809 RLFQ13129 1914 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 CCDC85CA6NKD9 419 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 USP17L2Q6R6M4 530 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 CCDC129Q6ZRS4 1044 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 TMEM179Q6ZVK1 233 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 CCDC17Q96LX7 622 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.96■□□□□ 0.95
IRF3-230ENST00000601809 PNMA3Q9UL41 463 aa20.96■□□□□ 0.95
IRF3-230ENST00000601809 A0A0D9SFI3 127 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 RGS19P49795 217 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 PABPC4Q13310 644 aaKnown RBP eCLIP20.95■□□□□ 0.94
IRF3-230ENST00000601809 FAM110CQ1W6H9 321 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 FAM227BQ96M60 508 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 HELLSQ9NRZ9 838 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 TMOD4Q9NZQ9 345 aa20.95■□□□□ 0.94
IRF3-230ENST00000601809 GNRH1P01148 92 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 RASA1P20936 1047 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 PSMC4P43686 418 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 CLEC10AQ8IUN9 316 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 P2RX7Q99572 595 aaKnown RBP20.94■□□□□ 0.94
IRF3-230ENST00000601809 MORF4L1Q9UBU8 362 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 PTCH2Q9Y6C5 1203 aa20.94■□□□□ 0.94
IRF3-230ENST00000601809 RBBP6Q7Z6E9 1792 aaKnown RBP20.93■□□□□ 0.94
IRF3-230ENST00000601809 PARP14Q460N5 1801 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 VCAM1P19320 739 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 OSBPP22059 807 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 GCLCP48506 637 aaPredicted RBP20.93■□□□□ 0.94
IRF3-230ENST00000601809 KIAA1755Q5JYT7 1200 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 VPS53Q5VIR6 699 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 SMCR8Q8TEV9 937 aaPredicted RBP20.93■□□□□ 0.94
IRF3-230ENST00000601809 ARMC5Q96C12 935 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 SRRDQ9UH36 339 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 DOCK3Q8IZD9 2030 aa20.93■□□□□ 0.94
IRF3-230ENST00000601809 PLXNB2O15031 1838 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 MPHOSPH10O00566 681 aaKnown RBP20.92■□□□□ 0.94
IRF3-230ENST00000601809 USP14P54578 494 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 KIF22Q14807 665 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 ARHGEF6Q15052 776 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 ZYXQ15942 572 aaKnown RBP20.92■□□□□ 0.94
IRF3-230ENST00000601809 ZNF589Q86UQ0 364 aaPredicted RBP20.92■□□□□ 0.94
IRF3-230ENST00000601809 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 TMX2Q9Y320 296 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 A0A0G2JMZ2 1700 aa20.92■□□□□ 0.94
IRF3-230ENST00000601809 IGKV6D-41A0A0C4DH26 115 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 MINDY4BA8MYZ0 360 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 TDO2P48775 406 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 PRMT2P55345 433 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 HERVK_113P62684 666 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 NMIQ13287 307 aaPredicted RBP20.91■□□□□ 0.94
IRF3-230ENST00000601809 CATSPERGQ6ZRH7 1159 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 FEZ1Q99689 392 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 TXNRD2Q9NNW7 524 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 RBPJLQ9UBG7 517 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 TACC3Q9Y6A5 838 aa20.91■□□□□ 0.94
IRF3-230ENST00000601809 GSPT1P15170 499 aaKnown RBP20.9■□□□□ 0.94
IRF3-230ENST00000601809 SDSP20132 328 aa20.9■□□□□ 0.94
IRF3-230ENST00000601809 ICA1Q05084 483 aa20.9■□□□□ 0.94
IRF3-230ENST00000601809 ALX1Q15699 326 aa20.9■□□□□ 0.94
IRF3-230ENST00000601809 MCMDC2Q4G0Z9 681 aa20.9■□□□□ 0.94
IRF3-230ENST00000601809 PLIN4Q96Q06 1357 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 TRIM6-TRIM34B2RNG4 842 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L15C9J2P7 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L13C9JLJ4 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L11C9JVI0 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L18D6R9N7 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L22D6RA61 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L17D6RBQ6 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L19D6RCP7 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L20D6RJB6 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 PEX10O60683 326 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 CNMDO75829 334 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 APPP05067 770 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 FCGRTP55899 365 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 IRX3P78415 501 aaPredicted RBP20.89■□□□□ 0.93
IRF3-230ENST00000601809 PPARAQ07869 468 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 USP17L24Q0WX57 530 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 LBX2Q6XYB7 198 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 ANAPC4Q9UJX5 808 aa20.89■□□□□ 0.93
IRF3-230ENST00000601809 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.89■□□□□ 0.93
IRF3-230ENST00000601809 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
IRF3-230ENST00000601809 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 ECM2O94769 699 aaPredicted RBP20.88■□□□□ 0.93
IRF3-230ENST00000601809 FMNL1O95466 1100 aaPredicted RBP20.88■□□□□ 0.93
IRF3-230ENST00000601809 PRKCZQ05513 592 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 NAPBQ9H115 298 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 KANSL2Q9H9L4 492 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 GABRQQ9UN88 632 aa20.88■□□□□ 0.93
IRF3-230ENST00000601809 MYPNQ86TC9 1320 aa20.87■□□□□ 0.93
IRF3-230ENST00000601809 FGRP09769 529 aa20.87■□□□□ 0.93
IRF3-230ENST00000601809 HSPD1P10809 573 aaKnown RBP20.87■□□□□ 0.93
IRF3-230ENST00000601809 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
IRF3-230ENST00000601809 Q3C1V9 767 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms