RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 PEX26Q7Z412 305 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 NME8Q8N427 588 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 CCDC197Q8NCU1 140 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 CARD6Q9BX69 1037 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 BAG2O95816 211 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 NAPAP54920 295 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 AFG3L2Q9Y4W6 797 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 Q6ZUG5 572 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 GNA14O95837 355 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 CFAP61Q8NHU2 1237 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 TNFAIP3P21580 790 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 EEF1DP29692 281 aaKnown RBP13.47□□□□□ -0.25
SHANK2-218ENST00000601538 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 PODNQ7Z5L7 613 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 BBOF1Q8ND07 529 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 CFAP74Q9C0B2 1584 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 GRAMD4Q6IC98 578 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
SHANK2-218ENST00000601538 PALMDQ9NP74 551 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 A0A1B0GW55 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 MAP3K7O43318 606 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L2P0CJ85 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L3P0CJ86 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L4P0CJ87 422 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L5P0CJ88 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L6P0CJ89 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4L7P0CJ90 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 MAN1A1P33908 653 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-218ENST00000601538 DUX4Q9UBX2 424 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
SHANK2-218ENST00000601538 CFAP73A6NFT4 308 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 SART1O43290 800 aaKnown RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 SDSP20132 328 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 RIC8AQ9NPQ8 531 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 GFAPP14136 432 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 PFDN6O15212 129 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 BRF1Q92994 677 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 CTNND2Q9UQB3 1225 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 RGS12O14924 1447 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 CYP2C19P33261 490 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 CAPRIN2Q6IMN6 1127 aaKnown RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
SHANK2-218ENST00000601538 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
SHANK2-218ENST00000601538 APOBRQ0VD83 1088 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 KRT5P13647 590 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 ZNF449Q6P9G9 518 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 NSMCE1Q8WV22 266 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 STX8Q9UNK0 236 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 IL9RQ01113 521 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 BIRC2Q13490 618 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 ABTB1Q969K4 478 aaPredicted RBP13.46□□□□□ -0.26
SHANK2-218ENST00000601538 FGFR1OP2Q9NVK5 253 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.26
SHANK2-218ENST00000601538 MRPS25P82663 173 aaKnown RBP13.45□□□□□ -0.26
SHANK2-218ENST00000601538 CCDC13Q8IYE1 715 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 LIG3P49916 1009 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 RCSD1Q6JBY9 416 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 RSBN1LQ6PCB5 846 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-218ENST00000601538 TMCO5AQ8N6Q1 288 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 NEK2P51955 445 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
SHANK2-218ENST00000601538 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-218ENST00000601538 VIPAS39Q9H9C1 493 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 PAK1Q13153 545 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 MMEL1Q495T6 779 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
SHANK2-218ENST00000601538 COPG1Q9Y678 874 aaKnown RBP13.45□□□□□ -0.26
SHANK2-218ENST00000601538 GOLGA8CPA6NN73 597 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 SLC30A9Q6PML9 568 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 SND1Q7KZF4 910 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms