RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 USP50Q70EL3 339 aaPredicted RBP26.38■■□□□ 1.81
IRF3-228ENST00000601291 NUP133Q8WUM0 1156 aa26.38■■□□□ 1.81
IRF3-228ENST00000601291 CEP95Q96GE4 821 aa26.38■■□□□ 1.81
IRF3-228ENST00000601291 CCDC196A0A1B0GTZ2 297 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 RXRAP19793 462 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 GJB2P29033 226 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 PPP2R5BQ15173 497 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 HOOK2Q96ED9 719 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 TEPSINQ96N21 525 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.37■■□□□ 1.81
IRF3-228ENST00000601291 SCAF8Q9UPN6 1271 aaKnown RBP26.37■■□□□ 1.81
IRF3-228ENST00000601291 IGKV6D-41A0A0C4DH26 115 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 CDKL5O76039 1030 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 EPHX2P34913 555 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 RTN1Q16799 776 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 ABCB5Q2M3G0 1257 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 TMEM179Q6ZVK1 233 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 CDAN1Q8IWY9 1227 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 CCDC144CPQ8IYA2 1237 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 MTMR4Q9NYA4 1195 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 UTRNP46939 3433 aa26.37■■□□□ 1.81
IRF3-228ENST00000601291 NOVP48745 357 aa26.36■■□□□ 1.81
IRF3-228ENST00000601291 HMGN5P82970 282 aaKnown RBP26.36■■□□□ 1.81
IRF3-228ENST00000601291 PNMA1Q8ND90 353 aa26.36■■□□□ 1.81
IRF3-228ENST00000601291 NSUN7Q8NE18 718 aaKnown RBP26.36■■□□□ 1.81
IRF3-228ENST00000601291 CABP5Q9NP86 173 aa26.36■■□□□ 1.81
IRF3-228ENST00000601291 TOP1P11387 765 aaKnown RBP26.35■■□□□ 1.81
IRF3-228ENST00000601291 MAP3K10Q02779 954 aa26.35■■□□□ 1.81
IRF3-228ENST00000601291 FANCBQ8NB91 859 aa26.35■■□□□ 1.81
IRF3-228ENST00000601291 SMARCC2Q8TAQ2 1214 aa26.35■■□□□ 1.81
IRF3-228ENST00000601291 DCPSQ96C86 337 aaKnown RBP26.35■■□□□ 1.81
IRF3-228ENST00000601291 TMEM47Q9BQJ4 181 aa26.35■■□□□ 1.81
IRF3-228ENST00000601291 KIF3AQ9Y496 699 aa26.35■■□□□ 1.81
IRF3-228ENST00000601291 GREB1LQ9C091 1923 aaPredicted RBP26.35■■□□□ 1.81
IRF3-228ENST00000601291 SCN4AP35499 1836 aa26.34■■□□□ 1.81
IRF3-228ENST00000601291 PTPDC1A2A3K4 754 aa26.34■■□□□ 1.81
IRF3-228ENST00000601291 TTLL1O95922 423 aa26.34■■□□□ 1.81
IRF3-228ENST00000601291 TROAPQ12815 778 aa26.34■■□□□ 1.81
IRF3-228ENST00000601291 MIGA2Q7L4E1 593 aa26.34■■□□□ 1.81
IRF3-228ENST00000601291 RBM28Q9NW13 759 aaKnown RBP26.34■■□□□ 1.81
IRF3-228ENST00000601291 GDF11O95390 407 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 CTDNEP1O95476 244 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 NUCB2P80303 420 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 DCAF15Q66K64 600 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 CTCFLQ8NI51 663 aaPredicted RBP26.33■■□□□ 1.81
IRF3-228ENST00000601291 KANSL2Q9H9L4 492 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 WDR90Q96KV7 1748 aa26.33■■□□□ 1.81
IRF3-228ENST00000601291 JAK2O60674 1132 aa26.33■■□□□ 1.8
IRF3-228ENST00000601291 CDC27P30260 824 aa26.33■■□□□ 1.8
IRF3-228ENST00000601291 ADD1P35611 737 aaKnown RBP26.33■■□□□ 1.8
IRF3-228ENST00000601291 FAM184AQ8NB25 1140 aa26.33■■□□□ 1.8
IRF3-228ENST00000601291 ZC3H15Q8WU90 426 aaKnown RBP26.33■■□□□ 1.8
IRF3-228ENST00000601291 MAP3K14Q99558 947 aa26.33■■□□□ 1.8
IRF3-228ENST00000601291 PDCP20941 246 aa26.32■■□□□ 1.8
IRF3-228ENST00000601291 KIF5BP33176 963 aa26.32■■□□□ 1.8
IRF3-228ENST00000601291 SULF1Q8IWU6 871 aa26.32■■□□□ 1.8
IRF3-228ENST00000601291 GH2P01242 217 aa26.31■■□□□ 1.8
IRF3-228ENST00000601291 NBPF12Q5TAG4 269 aaPredicted RBP26.31■■□□□ 1.8
IRF3-228ENST00000601291 TAF1DQ9H5J8 278 aaPredicted RBP26.31■■□□□ 1.8
IRF3-228ENST00000601291 FAM217BQ9NTX9 383 aaPredicted RBP26.31■■□□□ 1.8
IRF3-228ENST00000601291 CLIP2Q9UDT6 1046 aa26.31■■□□□ 1.8
IRF3-228ENST00000601291 PDIA4P13667 645 aaKnown RBP26.3■■□□□ 1.8
IRF3-228ENST00000601291 ICA1Q05084 483 aa26.3■■□□□ 1.8
IRF3-228ENST00000601291 SEPT2Q15019 361 aa26.3■■□□□ 1.8
IRF3-228ENST00000601291 PNMA8AQ86V59 439 aaPredicted RBP26.3■■□□□ 1.8
IRF3-228ENST00000601291 DDX11Q96FC9 970 aa26.3■■□□□ 1.8
IRF3-228ENST00000601291 NYAP2Q9P242 653 aa26.3■■□□□ 1.8
IRF3-228ENST00000601291 RAB3GAP1Q15042 981 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 SUPT20HL1Q3ZLR7 823 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 CLEC10AQ8IUN9 316 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 IFNAR1P17181 557 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 CAP2P40123 477 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 ATP2B2Q01814 1243 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 RRP1BQ14684 758 aaKnown RBP26.29■■□□□ 1.8
IRF3-228ENST00000601291 ZNF341Q9BYN7 854 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 ZBTB21Q9ULJ3 1066 aa26.29■■□□□ 1.8
IRF3-228ENST00000601291 DTNBO60941 627 aa26.28■■□□□ 1.8
IRF3-228ENST00000601291 GRM4Q14833 912 aa26.28■■□□□ 1.8
IRF3-228ENST00000601291 NTRK3Q16288 839 aa26.28■■□□□ 1.8
IRF3-228ENST00000601291 LARP1BQ659C4 914 aaKnown RBP26.28■■□□□ 1.8
IRF3-228ENST00000601291 EEF2P13639 858 aaKnown RBP26.27■■□□□ 1.8
IRF3-228ENST00000601291 GUCY1A2P33402 732 aa26.27■■□□□ 1.8
IRF3-228ENST00000601291 SHROOM1Q2M3G4 852 aaPredicted RBP26.27■■□□□ 1.8
IRF3-228ENST00000601291 EAPPQ56P03 285 aaPredicted RBP26.27■■□□□ 1.8
IRF3-228ENST00000601291 TRIM22Q8IYM9 498 aa26.27■■□□□ 1.8
IRF3-228ENST00000601291 LRRC47Q8N1G4 583 aaKnown RBP26.27■■□□□ 1.8
IRF3-228ENST00000601291 GINM1Q9NU53 330 aa26.27■■□□□ 1.8
IRF3-228ENST00000601291 ORC3Q9UBD5 711 aaPredicted RBP26.27■■□□□ 1.8
IRF3-228ENST00000601291 STK36Q9NRP7 1315 aa26.27■■□□□ 1.8
IRF3-228ENST00000601291 ASNSP08243 561 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 SYT1P21579 422 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 GNAQP50148 359 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 SSRP1Q08945 709 aaKnown RBP26.26■■□□□ 1.79
IRF3-228ENST00000601291 KRT26Q7Z3Y9 468 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 MKL1Q969V6 931 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 MTMR7Q9Y216 660 aa26.26■■□□□ 1.79
IRF3-228ENST00000601291 PHF20L1A8MW92 1017 aa26.25■■□□□ 1.79
IRF3-228ENST00000601291 POTECB2RU33 542 aa26.25■■□□□ 1.79
IRF3-228ENST00000601291 STX6O43752 255 aa26.25■■□□□ 1.79
IRF3-228ENST00000601291 JAG1P78504 1218 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms