RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 IL27Q8NEV9 243 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 CEP126Q9P2H0 1117 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 PI4KBQ9UBF8 816 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 HCN4Q9Y3Q4 1203 aa21.89■■□□□ 1.09
SSBP4-207ENST00000600244 RAG1P15918 1043 aa21.88■■□□□ 1.09
SSBP4-207ENST00000600244 SHROOM1Q2M3G4 852 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-207ENST00000600244 USP44Q9H0E7 712 aa21.88■■□□□ 1.09
SSBP4-207ENST00000600244 GINM1Q9NU53 330 aa21.88■■□□□ 1.09
SSBP4-207ENST00000600244 FBXO3Q9UK99 471 aa21.88■■□□□ 1.09
SSBP4-207ENST00000600244 CIAO1O76071 339 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 ADORA1P30542 326 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 PBX2P40425 430 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 CCDC85BQ15834 202 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-207ENST00000600244 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 WDR78Q5VTH9 848 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 OLFML2BQ68BL8 750 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 METTL16Q86W50 562 aaKnown RBP21.87■■□□□ 1.09
SSBP4-207ENST00000600244 PBX4Q9BYU1 374 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 DNAJC18Q9H819 358 aa21.87■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L2Q6R6M4 530 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 C12orf42Q96LP6 360 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 CXXC1Q9P0U4 656 aaPredicted RBP21.86■■□□□ 1.09
SSBP4-207ENST00000600244 BTBD7Q9P203 1132 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 PHF24Q9UPV7 400 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 IVNS1ABPQ9Y6Y0 642 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 CHD9Q3L8U1 2897 aa21.86■■□□□ 1.09
SSBP4-207ENST00000600244 TCF20Q9UGU0 1960 aaKnown RBP21.86■■□□□ 1.09
SSBP4-207ENST00000600244 SIPA1L1O43166 1804 aa21.85■■□□□ 1.09
SSBP4-207ENST00000600244 MYCNP04198 464 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-207ENST00000600244 LBX2Q6XYB7 198 aa21.85■■□□□ 1.09
SSBP4-207ENST00000600244 ERICH6Q7L0X2 663 aa21.85■■□□□ 1.09
SSBP4-207ENST00000600244 WDR63Q8IWG1 891 aa21.85■■□□□ 1.09
SSBP4-207ENST00000600244 EPHX3Q9H6B9 360 aa21.85■■□□□ 1.09
SSBP4-207ENST00000600244 GRXCR1A8MXD5 290 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L15C9J2P7 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L13C9JLJ4 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L11C9JVI0 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L18D6R9N7 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L22D6RA61 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L17D6RBQ6 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L19D6RCP7 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L20D6RJB6 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 LDHCP07864 332 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 USP17L24Q0WX57 530 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 RASIP1Q5U651 963 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.84■■□□□ 1.093e-8■□□□□ 9.2
SSBP4-207ENST00000600244 DHX36Q9H2U1 1008 aaKnown RBP21.84■■□□□ 1.09
SSBP4-207ENST00000600244 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
SSBP4-207ENST00000600244 CATSPERGQ6ZRH7 1159 aa21.83■■□□□ 1.09
SSBP4-207ENST00000600244 FOXP4Q8IVH2 680 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-207ENST00000600244 NSUN4Q96CB9 384 aaKnown RBP21.83■■□□□ 1.09
SSBP4-207ENST00000600244 SIL1Q9H173 461 aa21.83■■□□□ 1.09
SSBP4-207ENST00000600244 TMEM39AQ9NV64 488 aa21.83■■□□□ 1.09
SSBP4-207ENST00000600244 MUC6Q6W4X9 2439 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 GDF11O95390 407 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 FAM47AQ5JRC9 791 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 PRAMEF19Q5SWL8 479 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 C16orf59Q7L2K0 433 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 DPP9Q86TI2 863 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 TEX11Q8IYF3 940 aa21.82■■□□□ 1.08
SSBP4-207ENST00000600244 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
SSBP4-207ENST00000600244 IGFBP4P22692 258 aa21.81■■□□□ 1.08
SSBP4-207ENST00000600244 GSTO1P78417 241 aa21.81■■□□□ 1.08
SSBP4-207ENST00000600244 FAAP100Q0VG06 881 aa21.81■■□□□ 1.08
SSBP4-207ENST00000600244 PQBP1O60828 265 aaKnown RBP21.8■■□□□ 1.08
SSBP4-207ENST00000600244 ADORA2AP29274 412 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 TMEM31Q5JXX7 168 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 TMEM240Q5SV17 173 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 CCDC129Q6ZRS4 1044 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 ANKRD33Q7Z3H0 272 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 ALYREFQ86V81 257 aaKnown RBP21.8■■□□□ 1.08
SSBP4-207ENST00000600244 MIER1Q8N108 512 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 SLC44A5Q8NCS7 719 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 SH3RF3Q8TEJ3 882 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-207ENST00000600244 TOX2Q96NM4 488 aa21.8■■□□□ 1.08
SSBP4-207ENST00000600244 STRNO43815 780 aa21.79■■□□□ 1.08
SSBP4-207ENST00000600244 COBLO75128 1261 aa21.79■■□□□ 1.08
SSBP4-207ENST00000600244 TIMP1P01033 207 aa21.79■■□□□ 1.08
SSBP4-207ENST00000600244 IL15P40933 162 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-207ENST00000600244 TIMM10P62072 90 aa21.79■■□□□ 1.08
SSBP4-207ENST00000600244 TSPYL2Q9H2G4 693 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-207ENST00000600244 ZNF236Q9UL36 1845 aa21.78■■□□□ 1.08
SSBP4-207ENST00000600244 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
SSBP4-207ENST00000600244 TFF2Q03403 129 aa21.78■■□□□ 1.08
SSBP4-207ENST00000600244 SPDYE16A6NNV3 312 aaPredicted RBP21.77■■□□□ 1.08
SSBP4-207ENST00000600244 MFSD5Q6N075 450 aa21.77■■□□□ 1.08
SSBP4-207ENST00000600244 C11orf16Q9NQ32 467 aa21.77■■□□□ 1.08
SSBP4-207ENST00000600244 SMCHD1A6NHR9 2005 aa21.77■■□□□ 1.07
SSBP4-207ENST00000600244 A0A1W2PQ45 241 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-207ENST00000600244 A0A1W2PQY0 241 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 GPR37L1O60883 481 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 KCNQ1P51787 676 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 ZYXQ15942 572 aaKnown RBP21.76■■□□□ 1.07
SSBP4-207ENST00000600244 AAK1Q2M2I8 961 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 TBC1D9Q6ZT07 1266 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 CRACR2BQ8N4Y2 399 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-207ENST00000600244 SNX27Q96L92 541 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 MOV10L1Q9BXT6 1211 aaKnown RBP21.76■■□□□ 1.07
SSBP4-207ENST00000600244 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
SSBP4-207ENST00000600244 XPNPEP3Q9NQH7 507 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms