RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 TMTC3Q6ZXV5 915 aa12.3□□□□□ -0.44
ZNF544-215ENST00000599953 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
ZNF544-215ENST00000599953 ANKRD2Q9GZV1 360 aa12.3□□□□□ -0.44
ZNF544-215ENST00000599953 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
ZNF544-215ENST00000599953 V9GY48 417 aaPredicted RBP12.3□□□□□ -0.44
ZNF544-215ENST00000599953 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
ZNF544-215ENST00000599953 SLFN14P0C7P3 912 aa12.29□□□□□ -0.44
ZNF544-215ENST00000599953 TROAPQ12815 778 aa12.29□□□□□ -0.44
ZNF544-215ENST00000599953 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
ZNF544-215ENST00000599953 DHX58Q96C10 678 aa12.29□□□□□ -0.44
ZNF544-215ENST00000599953 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
ZNF544-215ENST00000599953 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
ZNF544-215ENST00000599953 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 STX10O60499 249 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 TRAPPC10P48553 1259 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 TBX2Q13207 712 aaPredicted RBP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 NSUN4Q96CB9 384 aaKnown RBP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 GSDMAQ96QA5 445 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 BAG1Q99933 345 aaPredicted RBP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 CNTNAP4Q9C0A0 1308 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 USP17L21D6R901 530 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 IGSF3O75054 1194 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 PLEKHA8P1O95397 391 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 KIF5BP33176 963 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 NLRP3Q96P20 1036 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF544-215ENST00000599953 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■□□□□ 9.4
ZNF544-215ENST00000599953 MYH2Q9UKX2 1941 aa12.28□□□□□ -0.44
ZNF544-215ENST00000599953 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 CYP2D7A0A087X1C5 515 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 PRDM1O75626 825 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.44
ZNF544-215ENST00000599953 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.44
ZNF544-215ENST00000599953 ELF2Q15723 593 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 CCDC93Q567U6 631 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 GRAMD1CQ8IYS0 662 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 SYMPKQ92797 1274 aaKnown RBP12.27□□□□□ -0.44
ZNF544-215ENST00000599953 INTS13Q9NVM9 706 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 DNAI1Q9UI46 699 aa12.27□□□□□ -0.44
ZNF544-215ENST00000599953 DDX41Q9UJV9 622 aaKnown RBP12.27□□□□□ -0.44
ZNF544-215ENST00000599953 MECOMQ03112 1051 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 ZNF827Q17R98 1081 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 SBK1Q52WX2 424 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 SPATA1Q5VX52 437 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 SPTY2D1Q68D10 685 aaPredicted RBP12.27□□□□□ -0.45
ZNF544-215ENST00000599953 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
ZNF544-215ENST00000599953 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
ZNF544-215ENST00000599953 CELF1Q92879 486 aaKnown RBP12.27□□□□□ -0.45
ZNF544-215ENST00000599953 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
ZNF544-215ENST00000599953 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.45
ZNF544-215ENST00000599953 COL4A1P02462 1669 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 BAZ2AQ9UIF9 1905 aaKnown RBP12.26□□□□□ -0.45
ZNF544-215ENST00000599953 SYNRGQ9UMZ2 1314 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 ZBTB22O15209 634 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 SCG2P13521 617 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 CALML3P27482 149 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 NLRP5P59047 1200 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
ZNF544-215ENST00000599953 FILIP1LQ4L180 1135 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 UTP14CQ5TAP6 766 aaKnown RBP12.26□□□□□ -0.45
ZNF544-215ENST00000599953 BICDL1Q6ZP65 573 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 USP49Q70CQ1 688 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 PAGE5Q96GU1 130 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 PPP2R2CQ9Y2T4 447 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 A0A1B0GTH6 734 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 AFMP43652 599 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 NR1I3Q14994 352 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 HSP90AA4PQ58FG1 418 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 TMEM139Q8IV31 216 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 REXO1L1PQ8IX06 675 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 IQUBQ8NA54 791 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 SHISA4Q96DD7 197 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
ZNF544-215ENST00000599953 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.45
ZNF544-215ENST00000599953 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
ZNF544-215ENST00000599953 LAMB1P07942 1786 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 MAST2Q6P0Q8 1798 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 hCG_1642624A0A1W2PR95 340 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 KCNQ2O43526 872 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 TPM1P09493 284 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 DMTNQ08495 405 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 DPYDQ12882 1025 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 ZNF174Q15697 407 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 PFKFB3Q16875 520 aaPredicted RBP12.25□□□□□ -0.45
ZNF544-215ENST00000599953 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
ZNF544-215ENST00000599953 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms