RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 CTGFP29279 349 aa33.71■■■□□ 2.99
ZNF558-206ENST00000599938 TMEM179Q6ZVK1 233 aa33.71■■■□□ 2.99
ZNF558-206ENST00000599938 ACER1Q8TDN7 264 aa33.71■■■□□ 2.99
ZNF558-206ENST00000599938 TRIM47Q96LD4 638 aa33.71■■■□□ 2.99
ZNF558-206ENST00000599938 EMILIN3Q9NT22 766 aa33.71■■■□□ 2.99
ZNF558-206ENST00000599938 MGAMO43451 1857 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 FMNL1O95466 1100 aaPredicted RBP33.7■■■□□ 2.99
ZNF558-206ENST00000599938 USP14P54578 494 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 SBK1Q52WX2 424 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 ANKRD13CQ8N6S4 541 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 KIAA1683Q9H0B3 1180 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 PTCH2Q9Y6C5 1203 aa33.7■■■□□ 2.99
ZNF558-206ENST00000599938 AKR1B1P15121 316 aa33.69■■■□□ 2.98
ZNF558-206ENST00000599938 GCLCP48506 637 aaPredicted RBP33.69■■■□□ 2.98
ZNF558-206ENST00000599938 FCGRTP55899 365 aa33.69■■■□□ 2.98
ZNF558-206ENST00000599938 PLEKHM2Q8IWE5 1019 aa33.69■■■□□ 2.98
ZNF558-206ENST00000599938 C12orf42Q96LP6 360 aa33.69■■■□□ 2.98
ZNF558-206ENST00000599938 MINDY4BA8MYZ0 360 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 TRIM6-TRIM34B2RNG4 842 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 HOXA7P31268 230 aaPredicted RBP33.68■■■□□ 2.98
ZNF558-206ENST00000599938 SOX10P56693 466 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 FAM110CQ1W6H9 321 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 CCDC17Q96LX7 622 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 NACAP1Q9BZK3 213 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 ROBO3Q96MS0 1386 aa33.68■■■□□ 2.98
ZNF558-206ENST00000599938 PATL2C9JE40 543 aaKnown RBP33.67■■■□□ 2.98
ZNF558-206ENST00000599938 PRMT2P55345 433 aa33.66■■■□□ 2.98
ZNF558-206ENST00000599938 CCDC129Q6ZRS4 1044 aa33.66■■■□□ 2.98
ZNF558-206ENST00000599938 OSBPL3Q9H4L5 887 aa33.66■■■□□ 2.98
ZNF558-206ENST00000599938 HOXD10P28358 340 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 ICA1Q05084 483 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 CLEC10AQ8IUN9 316 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 IFNL3Q8IZI9 196 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 STK11IPQ8N1F8 1099 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 SRRDQ9UH36 339 aa33.65■■■□□ 2.98
ZNF558-206ENST00000599938 MYPNQ86TC9 1320 aa33.64■■■□□ 2.98
ZNF558-206ENST00000599938 VCAM1P19320 739 aa33.64■■■□□ 2.98
ZNF558-206ENST00000599938 SLC9C1Q4G0N8 1177 aa33.64■■■□□ 2.98
ZNF558-206ENST00000599938 RILPL2Q969X0 211 aa33.64■■■□□ 2.98
ZNF558-206ENST00000599938 HERVK_113P62684 666 aa33.63■■■□□ 2.97
ZNF558-206ENST00000599938 ARMC5Q96C12 935 aa33.63■■■□□ 2.97
ZNF558-206ENST00000599938 P2RX7Q99572 595 aaKnown RBP33.63■■■□□ 2.97
ZNF558-206ENST00000599938 NAPBQ9H115 298 aa33.63■■■□□ 2.97
ZNF558-206ENST00000599938 A0A1W2PRG0 241 aa33.62■■■□□ 2.97
ZNF558-206ENST00000599938 TICAM2Q86XR7 235 aa33.62■■■□□ 2.97
ZNF558-206ENST00000599938 ARHGEF10LQ9HCE6 1279 aa33.62■■■□□ 2.97
ZNF558-206ENST00000599938 HELLSQ9NRZ9 838 aa33.62■■■□□ 2.97
ZNF558-206ENST00000599938 TNPO2O14787 897 aaKnown RBP33.61■■■□□ 2.97
ZNF558-206ENST00000599938 FAM227BQ96M60 508 aa33.61■■■□□ 2.97
ZNF558-206ENST00000599938 MKNK2Q9HBH9 465 aa33.61■■■□□ 2.97
ZNF558-206ENST00000599938 A0A0D9SFI3 127 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L15C9J2P7 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L13C9JLJ4 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L11C9JVI0 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L18D6R9N7 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L22D6RA61 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L17D6RBQ6 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L19D6RCP7 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L20D6RJB6 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 PRKCZQ05513 592 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 USP17L24Q0WX57 530 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 SH2D4AQ9H788 454 aa33.6■■■□□ 2.97
ZNF558-206ENST00000599938 GREB1LQ9C091 1923 aaPredicted RBP33.59■■■□□ 2.97
ZNF558-206ENST00000599938 RASA1P20936 1047 aa33.59■■■□□ 2.97
ZNF558-206ENST00000599938 RAET1EQ8TD07 263 aa33.59■■■□□ 2.97
ZNF558-206ENST00000599938 GTF3C2Q8WUA4 911 aaPredicted RBP33.59■■■□□ 2.97
ZNF558-206ENST00000599938 RPAP3Q9H6T3 665 aaPredicted RBP33.59■■■□□ 2.97
ZNF558-206ENST00000599938 MORF4L1Q9UBU8 362 aa33.59■■■□□ 2.97
ZNF558-206ENST00000599938 NBPF11Q86T75 865 aa33.58■■■□□ 2.97
ZNF558-206ENST00000599938 ZNF287Q9HBT7 754 aa33.58■■■□□ 2.97
ZNF558-206ENST00000599938 FOXP2O15409 715 aa33.57■■■□□ 2.96
ZNF558-206ENST00000599938 RGS19P49795 217 aa33.57■■■□□ 2.96
ZNF558-206ENST00000599938 ATP2B2Q01814 1243 aa33.57■■■□□ 2.96
ZNF558-206ENST00000599938 NMIQ13287 307 aaPredicted RBP33.57■■■□□ 2.96
ZNF558-206ENST00000599938 ZNF333Q96JL9 665 aa33.57■■■□□ 2.96
ZNF558-206ENST00000599938 KANSL2Q9H9L4 492 aa33.57■■■□□ 2.96
ZNF558-206ENST00000599938 BRCA2P51587 3418 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 PPARAQ07869 468 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 MCMDC2Q4G0Z9 681 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 VPS53Q5VIR6 699 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 CATSPERGQ6ZRH7 1159 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 SIAH1Q8IUQ4 282 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 SH3TC2Q8TF17 1288 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 PAGR1Q9BTK6 254 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 TXNRD2Q9NNW7 524 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 TMX2Q9Y320 296 aa33.56■■■□□ 2.96
ZNF558-206ENST00000599938 KIAA0100Q14667 2235 aaKnown RBP33.55■■■□□ 2.96
ZNF558-206ENST00000599938 PRDM1O75626 825 aa33.55■■■□□ 2.96
ZNF558-206ENST00000599938 SLC3A2P08195 630 aaKnown RBP33.55■■■□□ 2.96
ZNF558-206ENST00000599938 PDE4AP27815 886 aa33.55■■■□□ 2.96
ZNF558-206ENST00000599938 COA7Q96BR5 231 aa33.55■■■□□ 2.96
ZNF558-206ENST00000599938 GABRQQ9UN88 632 aa33.55■■■□□ 2.96
ZNF558-206ENST00000599938 DOCK3Q8IZD9 2030 aa33.54■■■□□ 2.96
ZNF558-206ENST00000599938 PEX10O60683 326 aa33.54■■■□□ 2.96
ZNF558-206ENST00000599938 EEF2P13639 858 aaKnown RBP33.54■■■□□ 2.96
ZNF558-206ENST00000599938 GPRC5AQ8NFJ5 357 aa33.54■■■□□ 2.96
ZNF558-206ENST00000599938 LPAR1Q92633 364 aa33.54■■■□□ 2.96
ZNF558-206ENST00000599938 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.54■■■□□ 2.96
ZNF558-206ENST00000599938 TANGO6Q9C0B7 1094 aa33.54■■■□□ 2.96
ZNF558-206ENST00000599938 VCPKMTQ9H867 229 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms