RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SHMT1P34896 483 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 GABPAQ06546 454 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 COA7Q96BR5 231 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 C12orf42Q96LP6 360 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
SH2D3A-208ENST00000599563 JAG1P78504 1218 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 GIMAP6Q6P9H5 292 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 ANKRD13CQ8N6S4 541 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 SLAIN1Q8ND83 568 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 APPBP2Q92624 585 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 KIAA1683Q9H0B3 1180 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 HTTP42858 3142 aa15.33■□□□□ 0.04
SH2D3A-208ENST00000599563 TNRC18O15417 2968 aaPredicted RBP15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 RNF113AO15541 343 aaKnown RBP15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 GNAT2P19087 354 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 CTGFP29279 349 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 GRK4P32298 578 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 CCDC17Q96LX7 622 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 ARPP21Q9UBL0 812 aaPredicted RBP15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 SLC4A4Q9Y6R1 1079 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
SH2D3A-208ENST00000599563 HERVK_113P62684 666 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 UBXN2AP68543 259 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 IRF5Q13568 498 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 PXYLP1Q8TE99 480 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 SEC62Q99442 399 aaKnown RBP15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 IL25Q9H293 177 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 EMILIN3Q9NT22 766 aa15.31■□□□□ 0.04
SH2D3A-208ENST00000599563 A0A0D9SFI3 127 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L15C9J2P7 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L13C9JLJ4 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L12C9JPN9 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L11C9JVI0 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L21D6R901 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L18D6R9N7 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 PRKAB2O43741 272 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 CAPN2P17655 700 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 PRKCZQ05513 592 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 SHROOM1Q2M3G4 852 aaPredicted RBP15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 TICAM2Q86XR7 235 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 SH3TC2Q8TF17 1288 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 BIN2Q9UBW5 565 aaPredicted RBP15.3■□□□□ 0.04
SH2D3A-208ENST00000599563 M0R2C6 588 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 ADCY3O60266 1144 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 ECM2O94769 699 aaPredicted RBP15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 FLT3LGP49771 235 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 SEPT2Q15019 361 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 SBK1Q52WX2 424 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 NKX2-3Q8TAU0 364 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 ARHGEF10LQ9HCE6 1279 aa15.29■□□□□ 0.04
SH2D3A-208ENST00000599563 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 CYP2D6P10635 497 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 CHMLP26374 656 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 MAPK4P31152 587 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 ZMYM1Q5SVZ6 1142 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 C16orf86Q6ZW13 317 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 CCAR1Q8IX12 1150 aaKnown RBP15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 LPAR1Q92633 364 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 NACAP1Q9BZK3 213 aa15.28■□□□□ 0.04
SH2D3A-208ENST00000599563 VCAM1P19320 739 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 CDK8P49336 464 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 CCNA1P78396 465 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 CTR9Q6PD62 1173 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 ACER1Q8TDN7 264 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 GABRQQ9UN88 632 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
SH2D3A-208ENST00000599563 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 GPAA1O43292 621 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 CDC45O75419 566 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 ERVK-9P63128 1117 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 ERVK-24P63145 666 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 ICA1Q05084 483 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 LBX2Q6XYB7 198 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
SH2D3A-208ENST00000599563 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms