RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 DCPSQ96C86 337 aaKnown RBP16.61■□□□□ 0.25
SYMPK-213ENST00000599460 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 SWAP70Q9UH65 585 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 GNG11P61952 73 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
SYMPK-213ENST00000599460 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-213ENST00000599460 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 FOXO4P98177 505 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
SYMPK-213ENST00000599460 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 CNNM4Q6P4Q7 775 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 PTGS1P23219 599 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-213ENST00000599460 CTNNBL1Q8WYA6 563 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-213ENST00000599460 ARID5AQ03989 594 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 CABP7Q86V35 215 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
SYMPK-213ENST00000599460 TRAF5O00463 557 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
SYMPK-213ENST00000599460 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 C21orf2O43822 256 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 NEFHP12036 1026 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 IMPG2Q9BZV3 1241 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 RTKN2Q8IZC4 609 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 NEK11Q8NG66 645 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 JADE2Q9NQC1 790 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 PPP1R2P41236 205 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
SYMPK-213ENST00000599460 ARHGEF35A5YM69 484 aa16.58■□□□□ 0.25
SYMPK-213ENST00000599460 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.25
SYMPK-213ENST00000599460 PKP1Q13835 747 aa16.58■□□□□ 0.25
SYMPK-213ENST00000599460 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.25
SYMPK-213ENST00000599460 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 DCAF17Q5H9S7 520 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-213ENST00000599460 DNM3Q9UQ16 869 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 SPATA31A5Q5VU36 1347 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 SPATA31A7Q8IWB4 1347 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 CCDC169A6NNP5 214 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 SEPT7Q16181 437 aaKnown RBP16.58■□□□□ 0.24
SYMPK-213ENST00000599460 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
SYMPK-213ENST00000599460 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
SYMPK-213ENST00000599460 ALAS1P13196 640 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 POSTNQ15063 836 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 INF2Q27J81 1249 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 GBP3Q9H0R5 595 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 CYP2E1P05181 493 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-213ENST00000599460 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 DYMQ7RTS9 669 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 FBXO11Q86XK2 927 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-213ENST00000599460 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 CPDO75976 1380 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 SMTNP53814 917 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 IFI16Q16666 785 aaKnown RBP16.57■□□□□ 0.24
SYMPK-213ENST00000599460 CCDC102AQ96A19 550 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-213ENST00000599460 SERPINB13Q9UIV8 391 aa16.57■□□□□ 0.24
SYMPK-213ENST00000599460 NFIXQ14938 502 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 TMCO3Q6UWJ1 677 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
SYMPK-213ENST00000599460 TTLL1O95922 423 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 ADALQ6DHV7 355 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 GDF11O95390 407 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
SYMPK-213ENST00000599460 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 STAMQ92783 540 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 DKC1O60832 514 aaKnown RBP eCLIP16.56■□□□□ 0.24
SYMPK-213ENST00000599460 EN1Q05925 392 aaPredicted RBP16.56■□□□□ 0.24
SYMPK-213ENST00000599460 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
SYMPK-213ENST00000599460 CD163L1Q9NR16 1453 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 CTNNA2P26232 953 aa16.56■□□□□ 0.24
SYMPK-213ENST00000599460 NLRP12P59046 1061 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms