RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 TMEM74Q96NL1 305 aa10.12□□□□□ -0.79
LINC00343-208ENST00000599264 CAPN6Q9Y6Q1 641 aa10.12□□□□□ -0.79
LINC00343-208ENST00000599264 CILPO75339 1184 aa10.11□□□□□ -0.79
LINC00343-208ENST00000599264 PF4P02776 101 aa10.11□□□□□ -0.79
LINC00343-208ENST00000599264 YARSP54577 528 aaKnown RBP10.11□□□□□ -0.79
LINC00343-208ENST00000599264 TAGLNQ01995 201 aaKnown RBP10.11□□□□□ -0.79
LINC00343-208ENST00000599264 OGFOD2Q6N063 350 aa10.11□□□□□ -0.79
LINC00343-208ENST00000599264 BNC2Q6ZN30 1099 aaPredicted RBP10.11□□□□□ -0.79
LINC00343-208ENST00000599264 FAM168AQ92567 244 aa10.11□□□□□ -0.79
LINC00343-208ENST00000599264 DPH2Q9BQC3 489 aaPredicted RBP10.11□□□□□ -0.79
LINC00343-208ENST00000599264 H3BS24 57 aa10.1□□□□□ -0.79
LINC00343-208ENST00000599264 ACSF2Q96CM8 615 aaPredicted RBP10.1□□□□□ -0.79
LINC00343-208ENST00000599264 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
LINC00343-208ENST00000599264 PRDM7Q9NQW5 492 aa10.1□□□□□ -0.79
LINC00343-208ENST00000599264 SEMA3GQ9NS98 782 aa10.1□□□□□ -0.79
LINC00343-208ENST00000599264 CNTNAP4Q9C0A0 1308 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 F6X3S4 739 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 SNAP47Q5SQN1 464 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 FAM13CQ8NE31 585 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 FLAD1Q8NFF5 587 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 PIWIL2Q8TC59 973 aaKnown RBP10.09□□□□□ -0.79
LINC00343-208ENST00000599264 CCDC120Q96HB5 630 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 ATP13A1Q9HD20 1204 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 ST14Q9Y5Y6 855 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 CFTRP13569 1480 aa10.09□□□□□ -0.79
LINC00343-208ENST00000599264 FAM221AA4D161 298 aa10.08□□□□□ -0.8
LINC00343-208ENST00000599264 POU5F2Q8N7G0 328 aa10.08□□□□□ -0.8
LINC00343-208ENST00000599264 TMEM40Q8WWA1 233 aa10.08□□□□□ -0.8
LINC00343-208ENST00000599264 RHOVQ96L33 236 aa10.08□□□□□ -0.8
LINC00343-208ENST00000599264 CARS2Q9HA77 564 aaKnown RBP10.08□□□□□ -0.8
LINC00343-208ENST00000599264 CEP131Q9UPN4 1083 aa10.08□□□□□ -0.8
LINC00343-208ENST00000599264 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
LINC00343-208ENST00000599264 IFT140Q96RY7 1462 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 F13A1P00488 732 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 AFMP43652 599 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 TMEM201Q5SNT2 666 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 LCE3BQ5TA77 95 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 CORINQ9Y5Q5 1042 aa10.07□□□□□ -0.8
LINC00343-208ENST00000599264 WIZO95785 1651 aa10.06□□□□□ -0.8
LINC00343-208ENST00000599264 EIF4G3O43432 1585 aaKnown RBP10.06□□□□□ -0.8
LINC00343-208ENST00000599264 MINDY4BA8MYZ0 360 aa10.06□□□□□ -0.8
LINC00343-208ENST00000599264 GOLM1Q8NBJ4 401 aa10.06□□□□□ -0.8
LINC00343-208ENST00000599264 UBE2FQ969M7 185 aa10.06□□□□□ -0.8
LINC00343-208ENST00000599264 PRDM2Q13029 1718 aa10.06□□□□□ -0.8
LINC00343-208ENST00000599264 TNK2Q07912 1038 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 MLECQ14165 292 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 MPP2Q14168 576 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 GIPC2Q8TF65 315 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
LINC00343-208ENST00000599264 KCNH3Q9ULD8 1083 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 CTNND2Q9UQB3 1225 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 CARMIL2Q6F5E8 1435 aa10.05□□□□□ -0.8
LINC00343-208ENST00000599264 FAM160A1Q05DH4 1040 aa10.04□□□□□ -0.8
LINC00343-208ENST00000599264 TMPRSS7Q7RTY8 843 aa10.04□□□□□ -0.8
LINC00343-208ENST00000599264 ZSWIM9Q86XI8 627 aa10.04□□□□□ -0.8
LINC00343-208ENST00000599264 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
LINC00343-208ENST00000599264 PRR36Q9H6K5 1346 aa10.04□□□□□ -0.8
LINC00343-208ENST00000599264 TNNI2P48788 182 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 KCNMB1Q16558 191 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 FAM53CQ9NYF3 392 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 REV1Q9UBZ9 1251 aa10.03□□□□□ -0.8
LINC00343-208ENST00000599264 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.8
LINC00343-208ENST00000599264 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
LINC00343-208ENST00000599264 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
LINC00343-208ENST00000599264 CWF19L2Q2TBE0 894 aaKnown RBP10.02□□□□□ -0.81
LINC00343-208ENST00000599264 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
LINC00343-208ENST00000599264 GPATCH2Q9NW75 528 aa10.02□□□□□ -0.81
LINC00343-208ENST00000599264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
LINC00343-208ENST00000599264 ZBTB7CA1YPR0 619 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 FARP2O94887 1054 aaPredicted RBP10.01□□□□□ -0.81
LINC00343-208ENST00000599264 HTR3BO95264 441 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 GDNFP39905 211 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 ERMP1Q7Z2K6 904 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 REC114Q7Z4M0 266 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 CCDC74BQ96LY2 380 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 ALPK1Q96QP1 1244 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 KLHL3Q9UH77 587 aa10.01□□□□□ -0.81
LINC00343-208ENST00000599264 GRIN3BO60391 1043 aa10□□□□□ -0.81
LINC00343-208ENST00000599264 HS2ST1Q7LGA3 356 aa10□□□□□ -0.81
LINC00343-208ENST00000599264 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
LINC00343-208ENST00000599264 RNF141Q8WVD5 230 aa10□□□□□ -0.81
LINC00343-208ENST00000599264 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
LINC00343-208ENST00000599264 EIF4A3P38919 411 aaKnown RBP9.99□□□□□ -0.81
LINC00343-208ENST00000599264 PHACTR4Q8IZ21 702 aa9.99□□□□□ -0.81
LINC00343-208ENST00000599264 KIRREL1Q96J84 757 aa9.99□□□□□ -0.81
LINC00343-208ENST00000599264 Q96M66 194 aa9.99□□□□□ -0.81
LINC00343-208ENST00000599264 GGT7Q9UJ14 662 aa9.99□□□□□ -0.81
LINC00343-208ENST00000599264 POLR3KQ9Y2Y1 108 aaPredicted RBP9.99□□□□□ -0.81
LINC00343-208ENST00000599264 BTBD11A6QL63 1104 aa9.98□□□□□ -0.81
LINC00343-208ENST00000599264 C8AP07357 584 aa9.98□□□□□ -0.81
LINC00343-208ENST00000599264 RAC2P15153 192 aa9.98□□□□□ -0.81
LINC00343-208ENST00000599264 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
LINC00343-208ENST00000599264 CREG2Q8IUH2 290 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms