RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 P2RX7Q99572 595 aaKnown RBP14.63□□□□□ -0.07
LIG1-217ENST00000599165 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
LIG1-217ENST00000599165 PNMA3Q9UL41 463 aa14.63□□□□□ -0.07
LIG1-217ENST00000599165 MYPNQ86TC9 1320 aa14.63□□□□□ -0.07
LIG1-217ENST00000599165 A0A0G2JMZ2 1700 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 FOXP2O15409 715 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 GPAA1O43292 621 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
LIG1-217ENST00000599165 CDK8P49336 464 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 PRMT2P55345 433 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 FCGRTP55899 365 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 USP17L2Q6R6M4 530 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
LIG1-217ENST00000599165 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
LIG1-217ENST00000599165 ERC2O15083 957 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 VCAM1P19320 739 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 GCLCP48506 637 aaPredicted RBP14.61□□□□□ -0.07
LIG1-217ENST00000599165 PDE1AP54750 535 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 HERVK_113P62684 666 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 AAMPQ13685 434 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
LIG1-217ENST00000599165 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.61□□□□□ -0.07
LIG1-217ENST00000599165 RBPJLQ9UBG7 517 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
LIG1-217ENST00000599165 ROBO3Q96MS0 1386 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 CNMDO75829 334 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 ZFYP08048 801 aaPredicted RBP14.6□□□□□ -0.07
LIG1-217ENST00000599165 FLT3LGP49771 235 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 PABPC4Q13310 644 aaKnown RBP eCLIP14.6□□□□□ -0.07
LIG1-217ENST00000599165 MTFR1Q15390 333 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 Q3C1V9 767 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 SBK1Q52WX2 424 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 LNPKQ9C0E8 428 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
LIG1-217ENST00000599165 EN2P19622 333 aaPredicted RBP14.59□□□□□ -0.07
LIG1-217ENST00000599165 IRX3P78415 501 aaPredicted RBP14.59□□□□□ -0.07
LIG1-217ENST00000599165 TMEM179Q6ZVK1 233 aa14.59□□□□□ -0.07
LIG1-217ENST00000599165 FEZ1Q99689 392 aa14.59□□□□□ -0.07
LIG1-217ENST00000599165 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
LIG1-217ENST00000599165 CABP5Q9NP86 173 aa14.59□□□□□ -0.07
LIG1-217ENST00000599165 ARPP21Q9UBL0 812 aaPredicted RBP14.59□□□□□ -0.07
LIG1-217ENST00000599165 GJD2Q9UKL4 321 aa14.59□□□□□ -0.07
LIG1-217ENST00000599165 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
LIG1-217ENST00000599165 TNPO2O14787 897 aaKnown RBP14.58□□□□□ -0.08
LIG1-217ENST00000599165 MYCP01106 439 aaPredicted RBP14.58□□□□□ -0.08
LIG1-217ENST00000599165 HOXD10P28358 340 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 GRK4P32298 578 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 IRF5Q13568 498 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 GIMAP6Q6P9H5 292 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 CCDC129Q6ZRS4 1044 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 PORCNQ9H237 461 aa14.58□□□□□ -0.08
LIG1-217ENST00000599165 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
LIG1-217ENST00000599165 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 ELNP15502 786 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 RASA1P20936 1047 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP14P54578 494 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 NUCB1Q02818 461 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 B4GALNT3Q6L9W6 998 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 SHISA4Q96DD7 197 aa14.57□□□□□ -0.08
LIG1-217ENST00000599165 SPDYE16A6NNV3 312 aaPredicted RBP14.56□□□□□ -0.08
LIG1-217ENST00000599165 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
LIG1-217ENST00000599165 ERVK-9P63128 1117 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 ERVK-24P63145 666 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 LBX2Q6XYB7 198 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 CHD1LQ86WJ1 897 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 PLEKHM2Q8IWE5 1019 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 CCDC17Q96LX7 622 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
LIG1-217ENST00000599165 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
LIG1-217ENST00000599165 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 TMX2Q9Y320 296 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 TACC3Q9Y6A5 838 aa14.56□□□□□ -0.08
LIG1-217ENST00000599165 IGKV6D-41A0A0C4DH26 115 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 MINDY4BA8MYZ0 360 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 ADCY3O60266 1144 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 EEF2P13639 858 aaKnown RBP14.55□□□□□ -0.08
LIG1-217ENST00000599165 GNAT2P19087 354 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 IRX6P78412 446 aaPredicted RBP14.55□□□□□ -0.08
LIG1-217ENST00000599165 ICA1Q05084 483 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 VPS53Q5VIR6 699 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 STK11IPQ8N1F8 1099 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms