RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ZNF589Q86UQ0 364 aaPredicted RBP14.4□□□□□ -0.1
ZNF548-209ENST00000598895 ACER1Q8TDN7 264 aa14.4□□□□□ -0.1
ZNF548-209ENST00000598895 NACAP1Q9BZK3 213 aa14.4□□□□□ -0.1
ZNF548-209ENST00000598895 ZCCHC17Q9NP64 241 aaKnown RBP14.4□□□□□ -0.1
ZNF548-209ENST00000598895 DIAPH3Q9NSV4 1193 aa14.4□□□□□ -0.1
ZNF548-209ENST00000598895 GINM1Q9NU53 330 aa14.4□□□□□ -0.1
ZNF548-209ENST00000598895 TMOD4Q9NZQ9 345 aa14.4□□□□□ -0.1
ZNF548-209ENST00000598895 PRDM1O75626 825 aa14.39□□□□□ -0.11
ZNF548-209ENST00000598895 CAP1Q01518 475 aa14.39□□□□□ -0.11
ZNF548-209ENST00000598895 MCMDC2Q4G0Z9 681 aa14.39□□□□□ -0.11
ZNF548-209ENST00000598895 NOM1Q5C9Z4 860 aaKnown RBP14.39□□□□□ -0.11
ZNF548-209ENST00000598895 SH3D19Q5HYK7 790 aa14.39□□□□□ -0.11
ZNF548-209ENST00000598895 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
ZNF548-209ENST00000598895 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
ZNF548-209ENST00000598895 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
ZNF548-209ENST00000598895 TRIM17Q9Y577 477 aa14.39□□□□□ -0.11
ZNF548-209ENST00000598895 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 CTDSPL2Q05D32 466 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
ZNF548-209ENST00000598895 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 ABHD8Q96I13 439 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 MKNK2Q9HBH9 465 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 ADGRA2Q96PE1 1338 aa14.38□□□□□ -0.11
ZNF548-209ENST00000598895 ROBO3Q96MS0 1386 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 A0A1W2PRG0 241 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 C19orf81C9J6K1 198 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 RASA1P20936 1047 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 PPARAQ07869 468 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 USP17L2Q6R6M4 530 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 C17orf99Q6UX52 265 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
ZNF548-209ENST00000598895 PEX10O60683 326 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 OSBPP22059 807 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 ICA1Q05084 483 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 ASCC2Q9H1I8 757 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-209ENST00000598895 INCENPQ9NQS7 918 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
ZNF548-209ENST00000598895 RAD21O60216 631 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 CTGFP29279 349 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 KIF22Q14807 665 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 ANKRD13CQ8N6S4 541 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 EFCC1Q9HA90 598 aa14.35□□□□□ -0.11
ZNF548-209ENST00000598895 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
ZNF548-209ENST00000598895 MGAMO43451 1857 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 HIP1O00291 1037 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 FGAP02671 866 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
ZNF548-209ENST00000598895 BCRP11274 1271 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
ZNF548-209ENST00000598895 VCAM1P19320 739 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 USP14P54578 494 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 HAND2P61296 217 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 C8orf34Q49A92 452 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 SIAH1Q8IUQ4 282 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 SPICE1Q8N0Z3 855 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 P2RX7Q99572 595 aaKnown RBP14.34□□□□□ -0.11
ZNF548-209ENST00000598895 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
ZNF548-209ENST00000598895 IL25Q9H293 177 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
ZNF548-209ENST00000598895 FMNL1O95466 1100 aaPredicted RBP14.33□□□□□ -0.12
ZNF548-209ENST00000598895 PSMC4P43686 418 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
ZNF548-209ENST00000598895 PDE4BQ07343 736 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 KIAA1755Q5JYT7 1200 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
ZNF548-209ENST00000598895 TICAM2Q86XR7 235 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
ZNF548-209ENST00000598895 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 HPS5Q9UPZ3 1129 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.12
ZNF548-209ENST00000598895 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 HOXA7P31268 230 aaPredicted RBP14.32□□□□□ -0.12
ZNF548-209ENST00000598895 HERVK_113P62684 666 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 TFAP4Q01664 338 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
ZNF548-209ENST00000598895 FBXO46Q6PJ61 603 aaPredicted RBP14.32□□□□□ -0.12
ZNF548-209ENST00000598895 TRIM47Q96LD4 638 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 PAGR1Q9BTK6 254 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 KANSL2Q9H9L4 492 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 PTPN22Q9Y2R2 807 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms