RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 SNX17Q15036 470 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 TMEM67Q5HYA8 995 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 PRAMEF19Q5SWL8 479 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 NOL9Q5SY16 702 aaKnown RBP5.68□□□□□ -1.5
HERC3-213ENST00000598772 GPR142Q7Z601 462 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 FAM83AQ86UY5 434 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 TDRD7Q8NHU6 1098 aaKnown RBP5.68□□□□□ -1.5
HERC3-213ENST00000598772 TEKT1Q969V4 418 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 FSD1Q9BTV5 496 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 DBF4Q9UBU7 674 aaPredicted RBP5.68□□□□□ -1.5
HERC3-213ENST00000598772 IQSEC3Q9UPP2 1182 aaPredicted RBP5.68□□□□□ -1.5
HERC3-213ENST00000598772 GRXCR2A6NFK2 248 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 GLRX3O76003 335 aaKnown RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 PCCAP05165 728 aaPredicted RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 NEFMP07197 916 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 PLCG2P16885 1265 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 CYP2C18P33260 490 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 VCPP55072 806 aaKnown RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 MAP2K5Q13163 448 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 GRB10Q13322 594 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 GRIK5Q16478 980 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 PKN1Q16512 942 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 Q3C1V9 767 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 LEXMQ3ZCV2 418 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 RASIP1Q5U651 963 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 FRMD5Q7Z6J6 570 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 KIAA2013Q8IYS2 634 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 TTLL11Q8NHH1 800 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 FAM151AQ8WW52 585 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 NKD2Q969F2 451 aaPredicted RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 PORCNQ9H237 461 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 IL23AQ9NPF7 189 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 CWC25Q9NXE8 425 aaPredicted RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.67□□□□□ -1.5
HERC3-213ENST00000598772 NUDCQ9Y266 331 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 UTYO14607 1347 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 GAKO14976 1311 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 ZNF521Q96K83 1311 aa5.67□□□□□ -1.5
HERC3-213ENST00000598772 PGK1P00558 417 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 SLURP2P0DP57 97 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 ATP2A2P16615 1042 aaKnown RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 IRS1P35568 1242 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 IRX5P78411 483 aaPredicted RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 GOLGA2Q08379 1002 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 TRIM28Q13263 835 aaKnown RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 PUM1Q14671 1186 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERC3-213ENST00000598772 NBPF20Q3BBV1 942 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 MORN1Q5T089 497 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 TRIM67Q6ZTA4 783 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 DPP9Q86TI2 863 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 FBXL6Q8N531 539 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 USP6NLQ92738 828 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 EDAQ92838 391 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 HINFPQ9BQA5 517 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 TXNRD2Q9NNW7 524 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 MTUS1Q9ULD2 1270 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 LAS1LQ9Y4W2 734 aaKnown RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 EP300Q09472 2414 aaPredicted RBP5.66□□□□□ -1.5
HERC3-213ENST00000598772 FAM208BQ5VWN6 2430 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 GVINP1Q7Z2Y8 2422 aa5.66□□□□□ -1.5
HERC3-213ENST00000598772 A0A0G2JMZ2 1700 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 A0A1W2PQ45 241 aaPredicted RBP5.65□□□□□ -1.5
HERC3-213ENST00000598772 A0A1W2PQY0 241 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 ITGA6P23229 1130 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 AVPR2P30518 371 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 HIBADHP31937 336 aaKnown RBP5.65□□□□□ -1.5
HERC3-213ENST00000598772 GYG1P46976 350 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 CCL23P55773 120 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 ERVK-9P63128 1117 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 ERVK-24P63145 666 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 ZP2Q05996 745 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 COL9A3Q14050 684 aaPredicted RBP5.65□□□□□ -1.5
HERC3-213ENST00000598772 CLUL1Q15846 466 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.5
HERC3-213ENST00000598772 FAM47AQ5JRC9 791 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 C1orf53Q5VUE5 145 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 RNF180Q86T96 592 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 VPS37DQ86XT2 251 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 RNF135Q8IUD6 432 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 ZFPM1Q8IX07 1006 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 PROCA1Q8NCQ7 364 aaPredicted RBP5.65□□□□□ -1.5
HERC3-213ENST00000598772 NPLOC4Q8TAT6 608 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 GDPD5Q8WTR4 605 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 CFAP53Q96M91 514 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 XPNPEP3Q9NQH7 507 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 STARD7Q9NQZ5 370 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 DACH1Q9UI36 760 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 FAM50BQ9Y247 325 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 CHMP3Q9Y3E7 222 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 IVNS1ABPQ9Y6Y0 642 aa5.65□□□□□ -1.5
HERC3-213ENST00000598772 RLFQ13129 1914 aa5.65□□□□□ -1.51
HERC3-213ENST00000598772 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.51
HERC3-213ENST00000598772 TECTAO75443 2155 aa5.65□□□□□ -1.51
HERC3-213ENST00000598772 SPEF2Q9C093 1822 aa5.64□□□□□ -1.51
HERC3-213ENST00000598772 VPS13AQ96RL7 3174 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms