RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 MTMR2Q13614 643 aa21.06■□□□□ 0.96
USHBP1-209ENST00000598570 USP17L2Q6R6M4 530 aa21.06■□□□□ 0.96
USHBP1-209ENST00000598570 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
USHBP1-209ENST00000598570 PARK7Q99497 189 aaKnown RBP21.06■□□□□ 0.96
USHBP1-209ENST00000598570 CCDC171Q6TFL3 1326 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 FGAP02671 866 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 APPP05067 770 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 TDO2P48775 406 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 GADL1Q6ZQY3 521 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 TNS4Q8IZW8 715 aa21.05■□□□□ 0.96
USHBP1-209ENST00000598570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
USHBP1-209ENST00000598570 USP14P54578 494 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 PPARAQ07869 468 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.96
USHBP1-209ENST00000598570 ERO1AQ96HE7 468 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 NAPBQ9H115 298 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 ZNF287Q9HBT7 754 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
USHBP1-209ENST00000598570 HTTP42858 3142 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 PLIN4Q96Q06 1357 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 MINDY4BA8MYZ0 360 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 CYP2C8P10632 490 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 NOVP48745 357 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
USHBP1-209ENST00000598570 DGKZQ13574 1117 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 RAB3GAP1Q15042 981 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 MCOLN1Q9GZU1 580 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 ASCC2Q9H1I8 757 aaPredicted RBP21.03■□□□□ 0.96
USHBP1-209ENST00000598570 SYNPO2Q9UMS6 1093 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 TACC3Q9Y6A5 838 aa21.03■□□□□ 0.96
USHBP1-209ENST00000598570 GNRH1P01148 92 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 CHMLP26374 656 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 GCLCP48506 637 aaPredicted RBP21.02■□□□□ 0.96
USHBP1-209ENST00000598570 LACTBP83111 547 aaPredicted RBP21.02■□□□□ 0.96
USHBP1-209ENST00000598570 POTEEQ6S8J3 1075 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 LBX2Q6XYB7 198 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 MKL1Q969V6 931 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 TMOD4Q9NZQ9 345 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 PNMA3Q9UL41 463 aa21.02■□□□□ 0.96
USHBP1-209ENST00000598570 ORC4O43929 436 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 OTOP1Q7RTM1 612 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 NEDD1Q8NHV4 660 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 DSCC1Q9BVC3 393 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 DIAPH3Q9NSV4 1193 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 NYAP2Q9P242 653 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 MORF4L1Q9UBU8 362 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 RLFQ13129 1914 aa21.01■□□□□ 0.95
USHBP1-209ENST00000598570 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
USHBP1-209ENST00000598570 OSBPP22059 807 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 CTGFP29279 349 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 PDE4BQ07343 736 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 CWC27Q6UX04 472 aaKnown RBP21■□□□□ 0.95
USHBP1-209ENST00000598570 CATSPERGQ6ZRH7 1159 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 LPAR1Q92633 364 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 IL25Q9H293 177 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 MKNK2Q9HBH9 465 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 CPA4Q9UI42 421 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 RAD50Q92878 1312 aa21■□□□□ 0.95
USHBP1-209ENST00000598570 SLC3A2P08195 630 aaKnown RBP20.99■□□□□ 0.95
USHBP1-209ENST00000598570 PCP11498 1178 aaKnown RBP20.99■□□□□ 0.95
USHBP1-209ENST00000598570 VCAM1P19320 739 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 NT5C2P49902 561 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 FAM110CQ1W6H9 321 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 KIAA1755Q5JYT7 1200 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 CD99L2Q8TCZ2 262 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 P2RX7Q99572 595 aaKnown RBP20.99■□□□□ 0.95
USHBP1-209ENST00000598570 NBPF3Q9H094 633 aa20.99■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L15C9J2P7 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L13C9JLJ4 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L11C9JVI0 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L18D6R9N7 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L22D6RA61 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L17D6RBQ6 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L19D6RCP7 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L20D6RJB6 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 MPHOSPH10O00566 681 aaKnown RBP20.98■□□□□ 0.95
USHBP1-209ENST00000598570 EEF2P13639 858 aaKnown RBP20.98■□□□□ 0.95
USHBP1-209ENST00000598570 ICA1Q05084 483 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 USP17L24Q0WX57 530 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 ARHGEF6Q15052 776 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 FBXO46Q6PJ61 603 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-209ENST00000598570 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-209ENST00000598570 MTMR4Q9NYA4 1195 aa20.98■□□□□ 0.95
USHBP1-209ENST00000598570 GTF3C2Q8WUA4 911 aaPredicted RBP20.97■□□□□ 0.95
USHBP1-209ENST00000598570 ABHD8Q96I13 439 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 SH2D4AQ9H788 454 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 VCPKMTQ9H867 229 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 ARHGEF10LQ9HCE6 1279 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 RBPJLQ9UBG7 517 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 PTPN22Q9Y2R2 807 aa20.97■□□□□ 0.95
USHBP1-209ENST00000598570 MGAMO43451 1857 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 PRMT2P55345 433 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 HERVK_113P62684 666 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 CLEC10AQ8IUN9 316 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 TRIM47Q96LD4 638 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 EFCC1Q9HA90 598 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms