RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L15C9J2P7 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L13C9JLJ4 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L11C9JVI0 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L18D6R9N7 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L22D6RA61 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L17D6RBQ6 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L19D6RCP7 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L20D6RJB6 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 E9PSI1 815 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 GLRX3O76003 335 aaKnown RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 GH2P01242 217 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 FOSL2P15408 326 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 CCNA1P78396 465 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 USP17L24Q0WX57 530 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 TRIM60Q495X7 471 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 SMC4Q9NTJ3 1288 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 LRP2BPQ9P2M1 347 aa18.04■□□□□ 0.48
SYMPK-211ENST00000598364 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
SYMPK-211ENST00000598364 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 BAG3O95817 575 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 ITGB8P26012 769 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 MTX1Q13505 466 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 ZYXQ15942 572 aaKnown RBP18.03■□□□□ 0.48
SYMPK-211ENST00000598364 WDR78Q5VTH9 848 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 ANO1Q5XXA6 986 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 USP38Q8NB14 1042 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 SAP30BPQ9UHR5 308 aaKnown RBP18.03■□□□□ 0.48
SYMPK-211ENST00000598364 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
SYMPK-211ENST00000598364 COL9A1P20849 921 aa18.02■□□□□ 0.48
SYMPK-211ENST00000598364 EPHB4P54760 987 aa18.02■□□□□ 0.48
SYMPK-211ENST00000598364 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
SYMPK-211ENST00000598364 TATDN1Q6P1N9 297 aa18.02■□□□□ 0.48
SYMPK-211ENST00000598364 ARRDC4Q8NCT1 418 aa18.02■□□□□ 0.48
SYMPK-211ENST00000598364 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.48
SYMPK-211ENST00000598364 FOCADQ5VW36 1801 aa18.02■□□□□ 0.47
SYMPK-211ENST00000598364 SPDYE16A6NNV3 312 aaPredicted RBP18.01■□□□□ 0.47
SYMPK-211ENST00000598364 PLCG2P16885 1265 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 VCAM1P19320 739 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 GORABQ5T7V8 394 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 C1orf53Q5VUE5 145 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 ACER1Q8TDN7 264 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 NOL10Q9BSC4 688 aaKnown RBP18.01■□□□□ 0.47
SYMPK-211ENST00000598364 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 SNRKQ9NRH2 765 aa18.01■□□□□ 0.47
SYMPK-211ENST00000598364 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
SYMPK-211ENST00000598364 CYP2E1P05181 493 aaPredicted RBP18■□□□□ 0.47
SYMPK-211ENST00000598364 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
SYMPK-211ENST00000598364 DYNLL1P63167 89 aaKnown RBP18■□□□□ 0.47
SYMPK-211ENST00000598364 GRIN2CQ14957 1233 aa18■□□□□ 0.47
SYMPK-211ENST00000598364 OLFML2BQ68BL8 750 aa18■□□□□ 0.47
SYMPK-211ENST00000598364 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
SYMPK-211ENST00000598364 KBTBD13C9JR72 458 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 SEPT4O43236 478 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 ADCYAP1R1P41586 468 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 RAPGEFL1Q9UHV5 662 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
SYMPK-211ENST00000598364 TNFRSF10AO00220 468 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 ANP32CO43423 234 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 COBLO75128 1261 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 HLA-DOAP06340 250 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 ADORA2AP29274 412 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 USP14P54578 494 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 TLE2Q04725 743 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 LRRC41Q15345 812 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 PRAMEF19Q5SWL8 479 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 FERMT2Q96AC1 680 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 FEZ1Q99689 392 aa17.98■□□□□ 0.47
SYMPK-211ENST00000598364 MOV10L1Q9BXT6 1211 aaKnown RBP17.98■□□□□ 0.47
SYMPK-211ENST00000598364 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
SYMPK-211ENST00000598364 GUCY1A2P33402 732 aa17.97■□□□□ 0.47
SYMPK-211ENST00000598364 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
SYMPK-211ENST00000598364 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
SYMPK-211ENST00000598364 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
SYMPK-211ENST00000598364 RPAP3Q9H6T3 665 aaPredicted RBP17.97■□□□□ 0.47
SYMPK-211ENST00000598364 ZNF236Q9UL36 1845 aa17.97■□□□□ 0.47
SYMPK-211ENST00000598364 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.47
SYMPK-211ENST00000598364 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
SYMPK-211ENST00000598364 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
SYMPK-211ENST00000598364 RNPC3Q96LT9 517 aaKnown RBP17.96■□□□□ 0.47
SYMPK-211ENST00000598364 PIH1D3Q9NQM4 214 aaKnown RBP17.96■□□□□ 0.47
SYMPK-211ENST00000598364 STRNO43815 780 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
SYMPK-211ENST00000598364 GNAI3P08754 354 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 DBNDD2Q9BQY9 259 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 EHD4Q9H223 541 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 SERPINB13Q9UIV8 391 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 PHF24Q9UPV7 400 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 XIRP2A4UGR9 3374 aa17.95■□□□□ 0.46
SYMPK-211ENST00000598364 MYO5AQ9Y4I1 1855 aaKnown RBP17.95■□□□□ 0.46
SYMPK-211ENST00000598364 KIAA0355O15063 1070 aa17.94■□□□□ 0.46
SYMPK-211ENST00000598364 ERCC3P19447 782 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms