RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 WASF1Q92558 559 aa17.58■□□□□ 0.41
IRF3-219ENST00000597636 ITIH6Q6UXX5 1313 aa17.58■□□□□ 0.41
IRF3-219ENST00000597636 ERVK-24P63145 666 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 PI16Q6UXB8 463 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 AFAP1L1Q8TED9 768 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 ANKRD65E5RJM6 399 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 NCAPH2Q6IBW4 605 aa17.58■□□□□ 0.4
IRF3-219ENST00000597636 FOXP1Q9H334 677 aaPredicted RBP17.58■□□□□ 0.4
IRF3-219ENST00000597636 COL18A1P39060 1754 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
IRF3-219ENST00000597636 IL2RBP14784 551 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■■□ 21.1
IRF3-219ENST00000597636 CSRNP2Q9H175 543 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 KCNJ14Q9UNX9 436 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 IFNAR1P17181 557 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 GUCY2CP25092 1073 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 CABP4P57796 275 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
IRF3-219ENST00000597636 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 APPP05067 770 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 DNAJC21Q5F1R6 531 aaKnown RBP17.56■□□□□ 0.4
IRF3-219ENST00000597636 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
IRF3-219ENST00000597636 CYP26C1Q6V0L0 522 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 EFCAB13Q8IY85 973 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 SLC12A7Q9Y666 1083 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
IRF3-219ENST00000597636 CPP00450 1065 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 LIFRP42702 1097 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 USP14P54578 494 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 ABHD10Q9NUJ1 306 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
IRF3-219ENST00000597636 ADD2P35612 726 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 MCM3P25205 808 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
IRF3-219ENST00000597636 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 GEMIN8Q9NWZ8 242 aaKnown RBP17.55■□□□□ 0.4
IRF3-219ENST00000597636 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
IRF3-219ENST00000597636 PPP1R3GB7ZBB8 358 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 AFMP43652 599 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 NR5A1Q13285 461 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
IRF3-219ENST00000597636 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 RNF225M0QZC1 329 aaPredicted RBP17.54■□□□□ 0.4
IRF3-219ENST00000597636 TRAPPC11Q7Z392 1133 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 SH3RF1Q7Z6J0 888 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 A0A087X0B3 334 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 GSDMAQ96QA5 445 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
IRF3-219ENST00000597636 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 ECM29Q5VYK3 1845 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 A0A087WUV0 522 aaPredicted RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 LRRC10BA6NIK2 292 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 IFIT3O14879 490 aaKnown RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 CASP1P29466 404 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 CCT6AP40227 531 aaKnown RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 AATFQ9NY61 560 aaKnown RBP eCLIP17.53■□□□□ 0.4
IRF3-219ENST00000597636 N4BP3O15049 544 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 CDC25AP30304 524 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 KRT31Q15323 416 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 COG1Q8WTW3 980 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 INCENPQ9NQS7 918 aa17.53■□□□□ 0.4
IRF3-219ENST00000597636 LIMA1Q9UHB6 759 aaKnown RBP17.53■□□□□ 0.4
IRF3-219ENST00000597636 MCAMP43121 646 aa17.52■□□□□ 0.4
IRF3-219ENST00000597636 DPYDQ12882 1025 aa17.52■□□□□ 0.4
IRF3-219ENST00000597636 STIM1Q13586 685 aa17.52■□□□□ 0.4
IRF3-219ENST00000597636 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
IRF3-219ENST00000597636 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
IRF3-219ENST00000597636 CDHR2Q9BYE9 1310 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 PSMD14O00487 310 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.39
IRF3-219ENST00000597636 EPSTI1Q96J88 318 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 FAM107BQ9H098 131 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 DEF6Q9H4E7 631 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 GUCA1BQ9UMX6 200 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.39
IRF3-219ENST00000597636 EP400Q96L91 3159 aa17.52■□□□□ 0.39
IRF3-219ENST00000597636 KRT9P35527 623 aa17.51■□□□□ 0.39
IRF3-219ENST00000597636 TRIM14Q14142 442 aa17.51■□□□□ 0.39
IRF3-219ENST00000597636 SUGP1Q8IWZ8 645 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms