RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 HIP1O00291 1037 aa19.57■□□□□ 0.72
CHERP-206ENST00000597261 MPHOSPH10O00566 681 aaKnown RBP19.57■□□□□ 0.72
CHERP-206ENST00000597261 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
CHERP-206ENST00000597261 ZNF589Q86UQ0 364 aaPredicted RBP19.57■□□□□ 0.72
CHERP-206ENST00000597261 CD99L2Q8TCZ2 262 aa19.57■□□□□ 0.72
CHERP-206ENST00000597261 NAPBQ9H115 298 aa19.57■□□□□ 0.72
CHERP-206ENST00000597261 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
CHERP-206ENST00000597261 FGAP02671 866 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 HSPD1P10809 573 aaKnown RBP19.56■□□□□ 0.72
CHERP-206ENST00000597261 RASA1P20936 1047 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 OSBPP22059 807 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 USP14P54578 494 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 OTOP1Q7RTM1 612 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 ABHD8Q96I13 439 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 ASCC2Q9H1I8 757 aaPredicted RBP19.56■□□□□ 0.72
CHERP-206ENST00000597261 KANSL2Q9H9L4 492 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 MKNK2Q9HBH9 465 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 ANAPC4Q9UJX5 808 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 PNMA3Q9UL41 463 aa19.56■□□□□ 0.72
CHERP-206ENST00000597261 LACTBP83111 547 aaPredicted RBP19.55■□□□□ 0.72
CHERP-206ENST00000597261 PPARAQ07869 468 aa19.55■□□□□ 0.72
CHERP-206ENST00000597261 ARHGEF6Q15052 776 aa19.55■□□□□ 0.72
CHERP-206ENST00000597261 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
CHERP-206ENST00000597261 CCDC171Q6TFL3 1326 aa19.54■□□□□ 0.72
CHERP-206ENST00000597261 FGRP09769 529 aa19.54■□□□□ 0.72
CHERP-206ENST00000597261 ZNF444Q8N0Y2 327 aaPredicted RBP19.54■□□□□ 0.72
CHERP-206ENST00000597261 P2RX7Q99572 595 aaKnown RBP19.54■□□□□ 0.72
CHERP-206ENST00000597261 EFCC1Q9HA90 598 aa19.54■□□□□ 0.72
CHERP-206ENST00000597261 TMX2Q9Y320 296 aa19.54■□□□□ 0.72
CHERP-206ENST00000597261 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
CHERP-206ENST00000597261 SLC3A2P08195 630 aaKnown RBP19.53■□□□□ 0.72
CHERP-206ENST00000597261 GCLCP48506 637 aaPredicted RBP19.53■□□□□ 0.72
CHERP-206ENST00000597261 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
CHERP-206ENST00000597261 PDE4BQ07343 736 aa19.53■□□□□ 0.72
CHERP-206ENST00000597261 STK11IPQ8N1F8 1099 aa19.53■□□□□ 0.72
CHERP-206ENST00000597261 FEZ1Q99689 392 aa19.53■□□□□ 0.72
CHERP-206ENST00000597261 DIAPH3Q9NSV4 1193 aa19.53■□□□□ 0.72
CHERP-206ENST00000597261 NAV1Q8NEY1 1877 aa19.53■□□□□ 0.72
CHERP-206ENST00000597261 IGKV6D-41A0A0C4DH26 115 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L15C9J2P7 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L11C9JVI0 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 GNRH1P01148 92 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 EEF2P13639 858 aaKnown RBP19.52■□□□□ 0.72
CHERP-206ENST00000597261 CTGFP29279 349 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 KIF22Q14807 665 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 FBXO46Q6PJ61 603 aaPredicted RBP19.52■□□□□ 0.72
CHERP-206ENST00000597261 CATSPERGQ6ZRH7 1159 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 SMCR8Q8TEV9 937 aaPredicted RBP19.52■□□□□ 0.72
CHERP-206ENST00000597261 ARHGAP39Q9C0H5 1083 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.72
CHERP-206ENST00000597261 BAZ2AQ9UIF9 1905 aaKnown RBP19.52■□□□□ 0.72
CHERP-206ENST00000597261 ZMYM6O95789 1325 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 PRDM1O75626 825 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 VCAM1P19320 739 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 ICA1Q05084 483 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 KIAA1755Q5JYT7 1200 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 POTEEQ6S8J3 1075 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 MKL1Q969V6 931 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 ARHGEF10LQ9HCE6 1279 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 INCENPQ9NQS7 918 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHERP-206ENST00000597261 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
CHERP-206ENST00000597261 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
CHERP-206ENST00000597261 CHMLP26374 656 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 PSMC4P43686 418 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 IRX3P78415 501 aaPredicted RBP19.5■□□□□ 0.71
CHERP-206ENST00000597261 CTDSPL2Q05D32 466 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 ZYXQ15942 572 aaKnown RBP19.5■□□□□ 0.71
CHERP-206ENST00000597261 CLEC10AQ8IUN9 316 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 ANKRD13CQ8N6S4 541 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 NEDD1Q8NHV4 660 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 TRIM47Q96LD4 638 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 NYAP2Q9P242 653 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 RBPJLQ9UBG7 517 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 MORF4L1Q9UBU8 362 aa19.5■□□□□ 0.71
CHERP-206ENST00000597261 HERVK_113P62684 666 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 FAM110CQ1W6H9 321 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 ERICH6BQ5W0A0 696 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 LPAR1Q92633 364 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 DSCC1Q9BVC3 393 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 SH2D4AQ9H788 454 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 VCPKMTQ9H867 229 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 HPS5Q9UPZ3 1129 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 PTPRFP10586 1907 aa19.49■□□□□ 0.71
CHERP-206ENST00000597261 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 ORC4O43929 436 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 NEFLP07196 543 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 PRMT2P55345 433 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 TFAP4Q01664 338 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 LBX2Q6XYB7 198 aa19.48■□□□□ 0.71
CHERP-206ENST00000597261 GTF3C2Q8WUA4 911 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms