RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 TCEANC2Q96MN5 208 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 LRRC2Q9BYS8 371 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 NAP1L2Q9ULW6 460 aaPredicted RBP10.97□□□□□ -0.65
ZNF548-206ENST00000597047 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 LAMA4Q16363 1823 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 DOCK1Q14185 1865 aa10.97□□□□□ -0.65
ZNF548-206ENST00000597047 WDR33Q9C0J8 1336 aaKnown RBP10.96□□□□□ -0.65
ZNF548-206ENST00000597047 ERICH2A1L162 156 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 IFIT3O14879 490 aaKnown RBP10.96□□□□□ -0.65
ZNF548-206ENST00000597047 IRF6O14896 467 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 GJA5P36382 358 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 ECE1P42892 770 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 VEGFBP49765 207 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
ZNF548-206ENST00000597047 PPATQ06203 517 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 MTMR2Q13614 643 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 KRT32Q14532 448 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 NOL9Q5SY16 702 aaKnown RBP10.96□□□□□ -0.65
ZNF548-206ENST00000597047 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 IQCA1Q86XH1 822 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 LRRC47Q8N1G4 583 aaKnown RBP10.96□□□□□ -0.65
ZNF548-206ENST00000597047 ZNF280CQ8ND82 737 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 NEDD1Q8NHV4 660 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 CEP95Q96GE4 821 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 BACH2Q9BYV9 841 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 C22orf23Q9BZE7 217 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 ZSWIM5Q9P217 1185 aa10.96□□□□□ -0.65
ZNF548-206ENST00000597047 CCL15-CCL14A0A0B4J2E2 113 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 PRC1O43663 620 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 SLC10A3P09131 477 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 CASTP20810 708 aaKnown RBP10.95□□□□□ -0.66
ZNF548-206ENST00000597047 HMGCS2P54868 508 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 PPIL2Q13356 520 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 CCL15Q16663 113 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 SPICE1Q8N0Z3 855 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 DNAJC5GQ8N7S2 189 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 ZIC5Q96T25 663 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 TMOD4Q9NZQ9 345 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
ZNF548-206ENST00000597047 TNKSO95271 1327 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 A0A1W2PRG0 241 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 TTLL1O95922 423 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 PCP11498 1178 aaKnown RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 PSMA5P28066 241 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 MCM5P33992 734 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 SNAPC2Q13487 334 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 WTAPQ15007 396 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 SART3Q15020 963 aaKnown RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 TMEM67Q5HYA8 995 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 NOL8Q76FK4 1167 aaKnown RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 RAB11FIP4Q86YS3 637 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 UPF3BQ9BZI7 483 aaKnown RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 KAT14Q9H8E8 782 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
ZNF548-206ENST00000597047 IL17RBQ9NRM6 502 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 GINM1Q9NU53 330 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 MYH4Q9Y623 1939 aa10.94□□□□□ -0.66
ZNF548-206ENST00000597047 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 FGRP09769 529 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 GTF2A2P52657 109 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 IKQ13123 557 aaPredicted RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 COL9A3Q14050 684 aaPredicted RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 IFIT1BQ5T764 474 aaKnown RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 MB21D2Q8IYB1 491 aaPredicted RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 TMEM47Q9BQJ4 181 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
ZNF548-206ENST00000597047 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
ZNF548-206ENST00000597047 MANSC4A6NHS7 340 aaPredicted RBP10.92□□□□□ -0.66
ZNF548-206ENST00000597047 CCDC69A6NI79 296 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 FAM155AB1AL88 458 aaPredicted RBP10.92□□□□□ -0.66
ZNF548-206ENST00000597047 CXCL11O14625 94 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 ZBTB48P10074 688 aaPredicted RBP10.92□□□□□ -0.66
ZNF548-206ENST00000597047 CETPP11597 493 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 BACE1P56817 501 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 ANTXR2P58335 489 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 NOGQ13253 232 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 CCDC96Q2M329 555 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 SLFN13Q68D06 897 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 Q6ZUG5 572 aa10.92□□□□□ -0.66
ZNF548-206ENST00000597047 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms