RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 M0R2C6 588 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 HOXD10P28358 340 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 CDK8P49336 464 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 USP14P54578 494 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 SEPT2Q15019 361 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 TMEM179Q6ZVK1 233 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 CHD1LQ86WJ1 897 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 AMOTL1Q8IY63 956 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 LNPKQ9C0E8 428 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 OSBPL3Q9H4L5 887 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 FMNL1O95466 1100 aaPredicted RBP15.65■□□□□ 0.1
USE1-207ENST00000596136 FCGRTP55899 365 aa15.65■□□□□ 0.1
USE1-207ENST00000596136 ANKRD13CQ8N6S4 541 aa15.65■□□□□ 0.1
USE1-207ENST00000596136 ZNF333Q96JL9 665 aa15.65■□□□□ 0.1
USE1-207ENST00000596136 SEC62Q99442 399 aaKnown RBP15.65■□□□□ 0.1
USE1-207ENST00000596136 P2RX7Q99572 595 aaKnown RBP15.65■□□□□ 0.1
USE1-207ENST00000596136 EPB41L4AQ9HCS5 686 aaPredicted RBP15.65■□□□□ 0.1
USE1-207ENST00000596136 MORF4L1Q9UBU8 362 aa15.65■□□□□ 0.1
USE1-207ENST00000596136 ROBO3Q96MS0 1386 aa15.64■□□□□ 0.09
USE1-207ENST00000596136 A0A1W2PRG0 241 aa15.64■□□□□ 0.09
USE1-207ENST00000596136 SOX10P56693 466 aa15.64■□□□□ 0.09
USE1-207ENST00000596136 SIAH1Q8IUQ4 282 aa15.64■□□□□ 0.09
USE1-207ENST00000596136 BRCA2P51587 3418 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L15C9J2P7 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L13C9JLJ4 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L11C9JVI0 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L18D6R9N7 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L22D6RA61 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L17D6RBQ6 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L19D6RCP7 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L20D6RJB6 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 AKR1B1P15121 316 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 HERVK_113P62684 666 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 IRX3P78415 501 aaPredicted RBP15.63■□□□□ 0.09
USE1-207ENST00000596136 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
USE1-207ENST00000596136 USP17L24Q0WX57 530 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 SLC9C1Q4G0N8 1177 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 POTEEQ6S8J3 1075 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 CATSPERGQ6ZRH7 1159 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 NBPF11Q86T75 865 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 PLEKHM2Q8IWE5 1019 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 IFNL3Q8IZI9 196 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 GTF3C2Q8WUA4 911 aaPredicted RBP15.63■□□□□ 0.09
USE1-207ENST00000596136 FEZ1Q99689 392 aa15.63■□□□□ 0.09
USE1-207ENST00000596136 RBBP6Q7Z6E9 1792 aaKnown RBP15.62■□□□□ 0.09
USE1-207ENST00000596136 TNRC18O15417 2968 aaPredicted RBP15.62■□□□□ 0.09
USE1-207ENST00000596136 MPHOSPH10O00566 681 aaKnown RBP15.62■□□□□ 0.09
USE1-207ENST00000596136 VCAM1P19320 739 aa15.62■□□□□ 0.09
USE1-207ENST00000596136 LBX2Q6XYB7 198 aa15.62■□□□□ 0.09
USE1-207ENST00000596136 RBPJLQ9UBG7 517 aa15.62■□□□□ 0.09
USE1-207ENST00000596136 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
USE1-207ENST00000596136 GREB1LQ9C091 1923 aaPredicted RBP15.62■□□□□ 0.09
USE1-207ENST00000596136 MYPNQ86TC9 1320 aa15.62■□□□□ 0.09
USE1-207ENST00000596136 TNPO2O14787 897 aaKnown RBP15.61■□□□□ 0.09
USE1-207ENST00000596136 FOXP2O15409 715 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 PRKCZQ05513 592 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 IRF5Q13568 498 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 ZYXQ15942 572 aaKnown RBP15.61■□□□□ 0.09
USE1-207ENST00000596136 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.61■□□□□ 0.09
USE1-207ENST00000596136 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 KANSL2Q9H9L4 492 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 TXNRD2Q9NNW7 524 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 HELLSQ9NRZ9 838 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 GABRQQ9UN88 632 aa15.61■□□□□ 0.09
USE1-207ENST00000596136 MINDY4BA8MYZ0 360 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 ECM2O94769 699 aaPredicted RBP15.6■□□□□ 0.09
USE1-207ENST00000596136 RASA1P20936 1047 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 TDO2P48775 406 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 FLT3LGP49771 235 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 GPRC5AQ8NFJ5 357 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 RAET1EQ8TD07 263 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 ARHGEF10LQ9HCE6 1279 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 GJD2Q9UKL4 321 aa15.6■□□□□ 0.09
USE1-207ENST00000596136 RLFQ13129 1914 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 APPP05067 770 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 GRK4P32298 578 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 ICA1Q05084 483 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 ALX1Q15699 326 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 Q3C1V9 767 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 KIAA1755Q5JYT7 1200 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 PXYLP1Q8TE99 480 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 SH3TC2Q8TF17 1288 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 LPAR1Q92633 364 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 COA7Q96BR5 231 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
USE1-207ENST00000596136 SH2D4AQ9H788 454 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 RABGAP1Q9Y3P9 1069 aa15.59■□□□□ 0.09
USE1-207ENST00000596136 MKI67P46013 3256 aaKnown RBP15.58■□□□□ 0.08
USE1-207ENST00000596136 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 CNMDO75829 334 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 ERVK-9P63128 1117 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 ERVK-24P63145 666 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 CLEC10AQ8IUN9 316 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 SLAIN1Q8ND83 568 aa15.58■□□□□ 0.08
USE1-207ENST00000596136 VCPKMTQ9H867 229 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms