RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 DYNLL2Q96FJ2 89 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 HAUS7Q99871 368 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 PORCNQ9H237 461 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
CCDC9-202ENST00000595659 ERVK-24P63145 666 aa20.59■□□□□ 0.89
CCDC9-202ENST00000595659 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
CCDC9-202ENST00000595659 COLQQ9Y215 455 aaPredicted RBP20.59■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L15C9J2P7 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L11C9JVI0 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L18D6R9N7 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L22D6RA61 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L19D6RCP7 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L20D6RJB6 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 HMGCRP04035 888 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 USP17L24Q0WX57 530 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 C12orf42Q96LP6 360 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.89
CCDC9-202ENST00000595659 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCDC9-202ENST00000595659 PAK6Q9NQU5 681 aaPredicted RBP20.58■□□□□ 0.89
CCDC9-202ENST00000595659 CYP2D7A0A087X1C5 515 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 VCAM1P19320 739 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 USP14P54578 494 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 TRIB2Q92519 343 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 CDK5RAP2Q96SN8 1893 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 NUDT12Q9BQG2 462 aa20.57■□□□□ 0.88
CCDC9-202ENST00000595659 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCDC9-202ENST00000595659 A0A1W2PRG0 241 aa20.56■□□□□ 0.88
CCDC9-202ENST00000595659 CNMDO75829 334 aa20.56■□□□□ 0.88
CCDC9-202ENST00000595659 CATSPERGQ6ZRH7 1159 aa20.56■□□□□ 0.88
CCDC9-202ENST00000595659 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
CCDC9-202ENST00000595659 CWC22Q9HCG8 908 aaKnown RBP20.56■□□□□ 0.88
CCDC9-202ENST00000595659 MGAMO43451 1857 aa20.56■□□□□ 0.88
CCDC9-202ENST00000595659 FOCADQ5VW36 1801 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 MAPK4P31152 587 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 GTF3C2Q8WUA4 911 aaPredicted RBP20.55■□□□□ 0.88
CCDC9-202ENST00000595659 HTATIP2Q9BUP3 242 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 CRISPLD2Q9H0B8 497 aa20.55■□□□□ 0.88
CCDC9-202ENST00000595659 CCL14Q16627 93 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 WDR78Q5VTH9 848 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 CLEC10AQ8IUN9 316 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 DIS3LQ8TF46 1054 aaKnown RBP20.54■□□□□ 0.88
CCDC9-202ENST00000595659 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
CCDC9-202ENST00000595659 PUS7LQ9H0K6 701 aaKnown RBP20.54■□□□□ 0.88
CCDC9-202ENST00000595659 HMX1Q9NP08 348 aaPredicted RBP20.54■□□□□ 0.88
CCDC9-202ENST00000595659 BTBD7Q9P203 1132 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 RABGAP1Q9Y3P9 1069 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 SLC4A4Q9Y6R1 1079 aa20.54■□□□□ 0.88
CCDC9-202ENST00000595659 RPTORQ8N122 1335 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 USP17L12C9JPN9 530 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 USP17L21D6R901 530 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 AKR1B1P15121 316 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 CHRDL2Q6WN34 429 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 ATP8A2Q9NTI2 1148 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
CCDC9-202ENST00000595659 PRKAR2AP13861 404 aaKnown RBP20.52■□□□□ 0.88
CCDC9-202ENST00000595659 KIAA1755Q5JYT7 1200 aa20.52■□□□□ 0.88
CCDC9-202ENST00000595659 MORN1Q5T089 497 aa20.52■□□□□ 0.88
CCDC9-202ENST00000595659 USP6NLQ92738 828 aa20.52■□□□□ 0.88
CCDC9-202ENST00000595659 DCTPP1Q9H773 170 aa20.52■□□□□ 0.88
CCDC9-202ENST00000595659 MYH1P12882 1939 aa20.52■□□□□ 0.88
CCDC9-202ENST00000595659 SPDYE16A6NNV3 312 aaPredicted RBP20.51■□□□□ 0.87
CCDC9-202ENST00000595659 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
CCDC9-202ENST00000595659 RGS2P41220 211 aa20.51■□□□□ 0.87
CCDC9-202ENST00000595659 C12orf60Q5U649 245 aa20.51■□□□□ 0.87
CCDC9-202ENST00000595659 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
CCDC9-202ENST00000595659 TANGO6Q9C0B7 1094 aa20.51■□□□□ 0.87
CCDC9-202ENST00000595659 SWAP70Q9UH65 585 aa20.51■□□□□ 0.87
CCDC9-202ENST00000595659 XRCC5P13010 732 aaKnown RBP20.5■□□□□ 0.87
CCDC9-202ENST00000595659 CDK8P49336 464 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 CCNA1P78396 465 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 CACNB2Q08289 660 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-202ENST00000595659 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 SAMD1Q6SPF0 538 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-202ENST00000595659 SIAH1Q8IUQ4 282 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 SPICE1Q8N0Z3 855 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 STK11IPQ8N1F8 1099 aa20.5■□□□□ 0.87
CCDC9-202ENST00000595659 EVI5O60447 810 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 MAP3K21Q5TCX8 1036 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 CTR9Q6PD62 1173 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 AMOTL1Q8IY63 956 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 NR2E3Q9Y5X4 410 aa20.49■□□□□ 0.87
CCDC9-202ENST00000595659 DDX60LQ5H9U9 1706 aaKnown RBP20.48■□□□□ 0.87
CCDC9-202ENST00000595659 CCND3P30281 292 aaPredicted RBP20.48■□□□□ 0.87
CCDC9-202ENST00000595659 FXR1P51114 621 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCDC9-202ENST00000595659 ATP2B2Q01814 1243 aa20.48■□□□□ 0.87
CCDC9-202ENST00000595659 ICA1Q05084 483 aa20.48■□□□□ 0.87
CCDC9-202ENST00000595659 MAP2K5Q13163 448 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms