RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 CDK8P49336 464 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 RGS19P49795 217 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 PRMT2P55345 433 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 SEPT2Q15019 361 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 FAM110CQ1W6H9 321 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 USP17L2Q6R6M4 530 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 TMEM179Q6ZVK1 233 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 EPB41L4AQ9HCS5 686 aaPredicted RBP18.92■□□□□ 0.62
ZNF550-207ENST00000595560 MPHOSPH10O00566 681 aaKnown RBP18.91■□□□□ 0.62
ZNF550-207ENST00000595560 USP14P54578 494 aa18.91■□□□□ 0.62
ZNF550-207ENST00000595560 IRX3P78415 501 aaPredicted RBP18.91■□□□□ 0.62
ZNF550-207ENST00000595560 TICAM2Q86XR7 235 aa18.91■□□□□ 0.62
ZNF550-207ENST00000595560 ARMC5Q96C12 935 aa18.91■□□□□ 0.62
ZNF550-207ENST00000595560 CCDC17Q96LX7 622 aa18.91■□□□□ 0.62
ZNF550-207ENST00000595560 SEC62Q99442 399 aaKnown RBP18.91■□□□□ 0.62
ZNF550-207ENST00000595560 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
ZNF550-207ENST00000595560 FMNL1O95466 1100 aaPredicted RBP18.9■□□□□ 0.62
ZNF550-207ENST00000595560 HOXD10P28358 340 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 FCGRTP55899 365 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 IRX6P78412 446 aaPredicted RBP18.9■□□□□ 0.62
ZNF550-207ENST00000595560 ANKRD13CQ8N6S4 541 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 ACER1Q8TDN7 264 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 SRRDQ9UH36 339 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 DOCK3Q8IZD9 2030 aa18.9■□□□□ 0.62
ZNF550-207ENST00000595560 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.61
ZNF550-207ENST00000595560 AKR1B1P15121 316 aa18.89■□□□□ 0.61
ZNF550-207ENST00000595560 TDO2P48775 406 aa18.89■□□□□ 0.61
ZNF550-207ENST00000595560 SOX10P56693 466 aa18.89■□□□□ 0.61
ZNF550-207ENST00000595560 ZYXQ15942 572 aaKnown RBP18.89■□□□□ 0.61
ZNF550-207ENST00000595560 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
ZNF550-207ENST00000595560 ECM2O94769 699 aaPredicted RBP18.88■□□□□ 0.61
ZNF550-207ENST00000595560 APPP05067 770 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 VCAM1P19320 739 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 HERVK_113P62684 666 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 SLC9C1Q4G0N8 1177 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 IFNL3Q8IZI9 196 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 NACAP1Q9BZK3 213 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 MORF4L1Q9UBU8 362 aa18.88■□□□□ 0.61
ZNF550-207ENST00000595560 ICA1Q05084 483 aa18.87■□□□□ 0.61
ZNF550-207ENST00000595560 MYPNQ86TC9 1320 aa18.87■□□□□ 0.61
ZNF550-207ENST00000595560 GTF3C2Q8WUA4 911 aaPredicted RBP18.87■□□□□ 0.61
ZNF550-207ENST00000595560 P2RX7Q99572 595 aaKnown RBP18.87■□□□□ 0.61
ZNF550-207ENST00000595560 KIAA0100Q14667 2235 aaKnown RBP18.86■□□□□ 0.61
ZNF550-207ENST00000595560 A0A1W2PRG0 241 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 MINDY4BA8MYZ0 360 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 TNPO2O14787 897 aaKnown RBP18.86■□□□□ 0.61
ZNF550-207ENST00000595560 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 NBPF11Q86T75 865 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 ZNF333Q96JL9 665 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 ARHGEF10LQ9HCE6 1279 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 HELLSQ9NRZ9 838 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 RLFQ13129 1914 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
ZNF550-207ENST00000595560 TRIM6-TRIM34B2RNG4 842 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 FOXP2O15409 715 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 RASA1P20936 1047 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 PRKCZQ05513 592 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 CATSPERGQ6ZRH7 1159 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 CCDC129Q6ZRS4 1044 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 CLEC10AQ8IUN9 316 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 NAPBQ9H115 298 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 SH2D4AQ9H788 454 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 KANSL2Q9H9L4 492 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 ZNF287Q9HBT7 754 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 BRCA2P51587 3418 aa18.85■□□□□ 0.61
ZNF550-207ENST00000595560 A0A0G2JMZ2 1700 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 RAET1EQ8TD07 263 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 LPAR1Q92633 364 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 MKNK2Q9HBH9 465 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 TXNRD2Q9NNW7 524 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
ZNF550-207ENST00000595560 A0A0D9SFI3 127 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
ZNF550-207ENST00000595560 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 GPRC5AQ8NFJ5 357 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 RILPL2Q969X0 211 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 COA7Q96BR5 231 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 FAM227BQ96M60 508 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.83■□□□□ 0.6
ZNF550-207ENST00000595560 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
ZNF550-207ENST00000595560 RBPJLQ9UBG7 517 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 GABRQQ9UN88 632 aa18.83■□□□□ 0.6
ZNF550-207ENST00000595560 TNRC18O15417 2968 aaPredicted RBP18.82■□□□□ 0.6
ZNF550-207ENST00000595560 GRK4P32298 578 aa18.82■□□□□ 0.6
ZNF550-207ENST00000595560 FLT3LGP49771 235 aa18.82■□□□□ 0.6
ZNF550-207ENST00000595560 ERVK-9P63128 1117 aa18.82■□□□□ 0.6
ZNF550-207ENST00000595560 ERVK-24P63145 666 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms