RNA–Protein interactions for RNA: ENST00000595379.1

PAF1-203, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-203ENST00000595379 HERVK_113Q902F9 699 aa11.8□□□□□ -0.52
PAF1-203ENST00000595379 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
PAF1-203ENST00000595379 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
PAF1-203ENST00000595379 TBX21Q9UL17 535 aa11.8□□□□□ -0.52
PAF1-203ENST00000595379 YBX2Q9Y2T7 364 aaKnown RBP11.8□□□□□ -0.52
PAF1-203ENST00000595379 ZNFX1Q9P2E3 1918 aaKnown RBP11.8□□□□□ -0.52
PAF1-203ENST00000595379 IFIT1P09914 478 aaKnown RBP11.79□□□□□ -0.52
PAF1-203ENST00000595379 MFSD5Q6N075 450 aa11.79□□□□□ -0.52
PAF1-203ENST00000595379 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
PAF1-203ENST00000595379 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
PAF1-203ENST00000595379 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
PAF1-203ENST00000595379 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
PAF1-203ENST00000595379 ZDBF2Q9HCK1 2354 aa11.79□□□□□ -0.52
PAF1-203ENST00000595379 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
PAF1-203ENST00000595379 PICALMQ13492 652 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 FAM47AQ5JRC9 791 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 LPIN2Q92539 896 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 KCNH6Q9H252 994 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 TMEM39AQ9NV64 488 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 TRIOO75962 3097 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 SPTBN4Q9H254 2564 aa11.78□□□□□ -0.52
PAF1-203ENST00000595379 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.53
PAF1-203ENST00000595379 BTDP43251 543 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 RAB30Q15771 203 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
PAF1-203ENST00000595379 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 C12orf42Q96LP6 360 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 BICC1Q9H694 974 aaKnown RBP11.77□□□□□ -0.53
PAF1-203ENST00000595379 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 COG5Q9UP83 839 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
PAF1-203ENST00000595379 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
PAF1-203ENST00000595379 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 VAMP4O75379 141 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 ZEB1P37275 1124 aaPredicted RBP11.76□□□□□ -0.53
PAF1-203ENST00000595379 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 ZNF365Q70YC5 407 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
PAF1-203ENST00000595379 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
PAF1-203ENST00000595379 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
PAF1-203ENST00000595379 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
PAF1-203ENST00000595379 SEMA3EO15041 775 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
PAF1-203ENST00000595379 COBLO75128 1261 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 ASNSP08243 561 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 CSF2RAP15509 400 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 RFX5P48382 616 aaPredicted RBP11.75□□□□□ -0.53
PAF1-203ENST00000595379 CDK7P50613 346 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 CCNA1P78396 465 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.53
PAF1-203ENST00000595379 WDR43Q15061 677 aaKnown RBP eCLIP11.75□□□□□ -0.53
PAF1-203ENST00000595379 CCSAPQ6IQ19 270 aaPredicted RBP11.75□□□□□ -0.53
PAF1-203ENST00000595379 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 ZNF521Q96K83 1311 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
PAF1-203ENST00000595379 FOCADQ5VW36 1801 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
PAF1-203ENST00000595379 SLC5A1P13866 664 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 VWCEQ96DN2 955 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
PAF1-203ENST00000595379 DCHS1Q96JQ0 3298 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
PAF1-203ENST00000595379 STRNO43815 780 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 ADAMTS4O75173 837 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 ACRP10323 421 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 ADORA2AP29274 412 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 PHKA1P46020 1223 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
PAF1-203ENST00000595379 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
PAF1-203ENST00000595379 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
PAF1-203ENST00000595379 DCDC2CA8MYV0 355 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 EYA2O00167 538 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
PAF1-203ENST00000595379 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
PAF1-203ENST00000595379 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms