RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ALX1Q15699 326 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 CPA4Q9UI42 421 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 AGTPBP1Q9UPW5 1226 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 CENPFP49454 3210 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 HTTP42858 3142 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 HIP1O00291 1037 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 TLR2O60603 784 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 HAND2P61296 217 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 TMEM179Q6ZVK1 233 aa18.32■□□□□ 0.52
USE1-206ENST00000595101 PROCA1Q8NCQ7 364 aaPredicted RBP18.32■□□□□ 0.52
USE1-206ENST00000595101 FAM47AQ5JRC9 791 aa18.31■□□□□ 0.52
USE1-206ENST00000595101 CCDC17Q96LX7 622 aa18.31■□□□□ 0.52
USE1-206ENST00000595101 FEZ1Q99689 392 aa18.31■□□□□ 0.52
USE1-206ENST00000595101 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
USE1-206ENST00000595101 ADGRA2Q96PE1 1338 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 PTPRFP10586 1907 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 PEX10O60683 326 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 FKTNO75072 461 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
USE1-206ENST00000595101 C19orf81C9J6K1 198 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 KCNA4P22459 653 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 ICA1Q05084 483 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 C17orf99Q6UX52 265 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 CD99L2Q8TCZ2 262 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
USE1-206ENST00000595101 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
USE1-206ENST00000595101 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
USE1-206ENST00000595101 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
USE1-206ENST00000595101 SP3Q02447 781 aa18.29■□□□□ 0.52
USE1-206ENST00000595101 NOM1Q5C9Z4 860 aaKnown RBP18.29■□□□□ 0.52
USE1-206ENST00000595101 ASCC2Q9H1I8 757 aaPredicted RBP18.29■□□□□ 0.52
USE1-206ENST00000595101 TMOD4Q9NZQ9 345 aa18.29■□□□□ 0.52
USE1-206ENST00000595101 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
USE1-206ENST00000595101 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
USE1-206ENST00000595101 CTGFP29279 349 aa18.28■□□□□ 0.52
USE1-206ENST00000595101 PTH1RQ03431 593 aa18.28■□□□□ 0.52
USE1-206ENST00000595101 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
USE1-206ENST00000595101 POTEEQ6S8J3 1075 aa18.28■□□□□ 0.52
USE1-206ENST00000595101 TBC1D10CQ8IV04 446 aa18.28■□□□□ 0.52
USE1-206ENST00000595101 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
USE1-206ENST00000595101 VCAM1P19320 739 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.52
USE1-206ENST00000595101 PDE4BQ07343 736 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 BMP2KLQ5H9B9 411 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 TNS4Q8IZW8 715 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 PARK7Q99497 189 aaKnown RBP18.27■□□□□ 0.52
USE1-206ENST00000595101 P2RX7Q99572 595 aaKnown RBP18.27■□□□□ 0.52
USE1-206ENST00000595101 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
USE1-206ENST00000595101 IGKV6D-41A0A0C4DH26 115 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 SGSM2O43147 1006 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 NMT2O60551 498 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 TFAP4Q01664 338 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 CEP95Q96GE4 821 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 C12orf42Q96LP6 360 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 TMX2Q9Y320 296 aa18.27■□□□□ 0.51
USE1-206ENST00000595101 ZMYM6O95789 1325 aa18.26■□□□□ 0.51
USE1-206ENST00000595101 BCRP11274 1271 aa18.26■□□□□ 0.51
USE1-206ENST00000595101 HOXA7P31268 230 aaPredicted RBP18.26■□□□□ 0.51
USE1-206ENST00000595101 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
USE1-206ENST00000595101 MCOLN1Q9GZU1 580 aa18.26■□□□□ 0.51
USE1-206ENST00000595101 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
USE1-206ENST00000595101 FGRP09769 529 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 TSPY3P0CV98 308 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 TSPY8P0CW00 308 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
USE1-206ENST00000595101 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 IL17RBQ9NRM6 502 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 USP14P54578 494 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 RPAP3Q9H6T3 665 aaPredicted RBP18.25■□□□□ 0.51
USE1-206ENST00000595101 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 ARHGEF10LQ9HCE6 1279 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 TOMM22Q9NS69 142 aa18.25■□□□□ 0.51
USE1-206ENST00000595101 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
USE1-206ENST00000595101 OSBPP22059 807 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 IRX3P78415 501 aaPredicted RBP18.24■□□□□ 0.51
USE1-206ENST00000595101 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
USE1-206ENST00000595101 OTOP1Q7RTM1 612 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
USE1-206ENST00000595101 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 TXNRD2Q9NNW7 524 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 MTMR4Q9NYA4 1195 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 TAF6LQ9Y6J9 622 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 BRCA2P51587 3418 aa18.24■□□□□ 0.51
USE1-206ENST00000595101 NEDD4P46934 1319 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 RAD50Q92878 1312 aa18.23■□□□□ 0.51
USE1-206ENST00000595101 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms