RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 ZSCAN10Q96SZ4 725 aaPredicted RBP17.17■□□□□ 0.34
CAPN12-202ENST00000593700 MFRPQ9BY79 579 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 EVCP57679 992 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 CCDC17Q96LX7 622 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 HERC5Q9UII4 1024 aaKnown RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 KIF3AQ9Y496 699 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
CAPN12-202ENST00000593700 POLR2AP24928 1970 aaKnown RBP17.16■□□□□ 0.34
CAPN12-202ENST00000593700 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 PFKFB2O60825 505 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 RASA1P20936 1047 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 TFAP4Q01664 338 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 GABPAQ06546 454 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 TCP11L1Q9NUJ3 509 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
CAPN12-202ENST00000593700 DOCK1Q14185 1865 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 ZBTB43O43298 467 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 LARGE1O95461 756 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 POTEJP0CG39 1038 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 CALM1P0DP23 149 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 CALM2P0DP24 149 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 CALM3P0DP25 149 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
CAPN12-202ENST00000593700 STK3Q13188 491 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
CAPN12-202ENST00000593700 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
CAPN12-202ENST00000593700 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
CAPN12-202ENST00000593700 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 NID2Q14112 1375 aa17.14■□□□□ 0.33
CAPN12-202ENST00000593700 CCDC196A0A1B0GTZ2 297 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 DDTLA6NHG4 134 aaPredicted RBP17.13■□□□□ 0.33
CAPN12-202ENST00000593700 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 CPLX1O14810 134 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 CDKL5O76039 1030 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 DDAH1O94760 285 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
CAPN12-202ENST00000593700 EVX2Q03828 476 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
CAPN12-202ENST00000593700 KRT26Q7Z3Y9 468 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 CATIPQ7Z7H3 387 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
CAPN12-202ENST00000593700 NEDD1Q8NHV4 660 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
CAPN12-202ENST00000593700 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 EGFRP00533 1210 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
CAPN12-202ENST00000593700 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
CAPN12-202ENST00000593700 SEC23AQ15436 765 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
CAPN12-202ENST00000593700 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
CAPN12-202ENST00000593700 HSPA6P17066 643 aa17.11■□□□□ 0.33
CAPN12-202ENST00000593700 APLP1P51693 650 aa17.11■□□□□ 0.33
CAPN12-202ENST00000593700 NUCB2P80303 420 aa17.11■□□□□ 0.33
CAPN12-202ENST00000593700 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
CAPN12-202ENST00000593700 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
CAPN12-202ENST00000593700 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
CAPN12-202ENST00000593700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
CAPN12-202ENST00000593700 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
CAPN12-202ENST00000593700 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
CAPN12-202ENST00000593700 MAP3K13O43283 966 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 PDCP20941 246 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 SHMT1P34896 483 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 NF2P35240 595 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
CAPN12-202ENST00000593700 SCRN1Q12765 414 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 RASA3Q14644 834 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 CERKLQ49MI3 558 aaPredicted RBP17.1■□□□□ 0.33
CAPN12-202ENST00000593700 SH3BP5LQ7L8J4 393 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
CAPN12-202ENST00000593700 CTCFLQ8NI51 663 aaPredicted RBP17.1■□□□□ 0.33
CAPN12-202ENST00000593700 KCNV2Q8TDN2 545 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms