RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 TRIM43Q96BQ3 446 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-221ENST00000593639 C12orf42Q96LP6 360 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 MEIS3Q99687 375 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
SRRM1-221ENST00000593639 USP17L15C9J2P7 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L13C9JLJ4 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L11C9JVI0 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L18D6R9N7 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L22D6RA61 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L17D6RBQ6 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L19D6RCP7 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L20D6RJB6 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 GH2P01242 217 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 PPP4CP60510 307 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 USP17L24Q0WX57 530 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-221ENST00000593639 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 SMC4Q9NTJ3 1288 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
SRRM1-221ENST00000593639 RAPGEFL1Q9UHV5 662 aa11.33□□□□□ -0.6
SRRM1-221ENST00000593639 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 BAG3O95817 575 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 VCAM1P19320 739 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 ITGB8P26012 769 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 EPHB4P54760 987 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 GORABQ5T7V8 394 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 FEZ1Q99689 392 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
SRRM1-221ENST00000593639 NOB1Q9ULX3 412 aaKnown RBP11.32□□□□□ -0.6
SRRM1-221ENST00000593639 IVNS1ABPQ9Y6Y0 642 aa11.32□□□□□ -0.6
SRRM1-221ENST00000593639 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 TMEM265A0A087WTH1 108 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
SRRM1-221ENST00000593639 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 E9PSI1 815 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
SRRM1-221ENST00000593639 PLCG2P16885 1265 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 OLFML2BQ68BL8 750 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 LBX2Q6XYB7 198 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 FERMT2Q96AC1 680 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
SRRM1-221ENST00000593639 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
SRRM1-221ENST00000593639 SEPT4O43236 478 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 ADORA2AP29274 412 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 TLE2Q04725 743 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 MTX1Q13505 466 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 DPP9Q86TI2 863 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
SRRM1-221ENST00000593639 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
SRRM1-221ENST00000593639 ANP32CO43423 234 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 COBLO75128 1261 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 USP14P54578 494 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 DYNLL1P63167 89 aaKnown RBP11.29□□□□□ -0.6
SRRM1-221ENST00000593639 SLFN5Q08AF3 891 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 LRRC41Q15345 812 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 MOV10L1Q9BXT6 1211 aaKnown RBP11.29□□□□□ -0.6
SRRM1-221ENST00000593639 LTBP2Q14767 1821 aa11.29□□□□□ -0.6
SRRM1-221ENST00000593639 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
SRRM1-221ENST00000593639 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-221ENST00000593639 DNAJB2P25686 324 aa11.28□□□□□ -0.6
SRRM1-221ENST00000593639 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
SRRM1-221ENST00000593639 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
SRRM1-221ENST00000593639 PIH1D3Q9NQM4 214 aaKnown RBP11.28□□□□□ -0.6
SRRM1-221ENST00000593639 TACC3Q9Y6A5 838 aa11.28□□□□□ -0.6
SRRM1-221ENST00000593639 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 CLTBP09497 229 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 ERCC3P19447 782 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 GUCY1A2P33402 732 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 ABCB5Q2M3G0 1257 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
SRRM1-221ENST00000593639 PPP4R3CPQ6ZMV5 832 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 SPATC1LQ9H0A9 340 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 ZNF576Q9H609 170 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 PHF24Q9UPV7 400 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.61
SRRM1-221ENST00000593639 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms