RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ERVK-9P63128 1117 aa21.69■■□□□ 1.06
CIRBP-243ENST00000593128 ERVK-24P63145 666 aa21.69■■□□□ 1.06
CIRBP-243ENST00000593128 Q3C1V9 767 aa21.69■■□□□ 1.06
CIRBP-243ENST00000593128 CHRDL2Q6WN34 429 aa21.69■■□□□ 1.06
CIRBP-243ENST00000593128 NUDT12Q9BQG2 462 aa21.69■■□□□ 1.06
CIRBP-243ENST00000593128 TCRBV5S4A2TA0A5A2 114 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L15C9J2P7 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L13C9JLJ4 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L11C9JVI0 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L18D6R9N7 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L22D6RA61 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L17D6RBQ6 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L19D6RCP7 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L20D6RJB6 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 SMARCA5O60264 1052 aaPredicted RBP21.68■■□□□ 1.06
CIRBP-243ENST00000593128 CYP2D6P10635 497 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP14P54578 494 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 USP17L24Q0WX57 530 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 SEPT2Q15019 361 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 TRIB2Q92519 343 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.68■■□□□ 1.061e-7■■■□□ 16.4
CIRBP-243ENST00000593128 HMX1Q9NP08 348 aaPredicted RBP21.68■■□□□ 1.06
CIRBP-243ENST00000593128 PAK6Q9NQU5 681 aaPredicted RBP21.68■■□□□ 1.06
CIRBP-243ENST00000593128 MYH8P13535 1937 aa21.68■■□□□ 1.06
CIRBP-243ENST00000593128 MBD4O95243 580 aa21.67■■□□□ 1.06
CIRBP-243ENST00000593128 MAPK4P31152 587 aa21.67■■□□□ 1.06
CIRBP-243ENST00000593128 UBE2Q1Q7Z7E8 422 aa21.67■■□□□ 1.06
CIRBP-243ENST00000593128 GTF3C2Q8WUA4 911 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-243ENST00000593128 SOCS4Q8WXH5 440 aa21.67■■□□□ 1.06
CIRBP-243ENST00000593128 PORCNQ9H237 461 aa21.67■■□□□ 1.06
CIRBP-243ENST00000593128 PRKAB2O43741 272 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 VCAM1P19320 739 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 GPR142Q7Z601 462 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 SLC44A5Q8NCS7 719 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 PAWRQ96IZ0 340 aaKnown RBP21.66■■□□□ 1.06
CIRBP-243ENST00000593128 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 LRRCC1Q9C099 1032 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 KIAA1683Q9H0B3 1180 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 RPAP3Q9H6T3 665 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-243ENST00000593128 DCP1AQ9NPI6 582 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-243ENST00000593128 NR2E3Q9Y5X4 410 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 MYH7P12883 1935 aa21.66■■□□□ 1.06
CIRBP-243ENST00000593128 BAZ2AQ9UIF9 1905 aaKnown RBP21.66■■□□□ 1.06
CIRBP-243ENST00000593128 EVI5O60447 810 aa21.65■■□□□ 1.06
CIRBP-243ENST00000593128 ZKSCAN1P17029 563 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-243ENST00000593128 ATP5JP18859 108 aa21.65■■□□□ 1.06
CIRBP-243ENST00000593128 ADD2P35612 726 aa21.65■■□□□ 1.06
CIRBP-243ENST00000593128 PLEKHH3Q7Z736 793 aa21.65■■□□□ 1.06
CIRBP-243ENST00000593128 DIS3LQ8TF46 1054 aaKnown RBP21.65■■□□□ 1.06
CIRBP-243ENST00000593128 DYNLL2Q96FJ2 89 aa21.65■■□□□ 1.06
CIRBP-243ENST00000593128 RPTORQ8N122 1335 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 CHGBP05060 677 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 PRKAR2AP13861 404 aaKnown RBP21.64■■□□□ 1.05
CIRBP-243ENST00000593128 GUCY1A2P33402 732 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 RGS2P41220 211 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 CATSPERGQ6ZRH7 1159 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 HAUS7Q99871 368 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 CRISPLD2Q9H0B8 497 aa21.64■■□□□ 1.05
CIRBP-243ENST00000593128 CCNA1P78396 465 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 GABPAQ06546 454 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 POTEEQ6S8J3 1075 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 SAMD1Q6SPF0 538 aaPredicted RBP21.63■■□□□ 1.05
CIRBP-243ENST00000593128 NECAB2Q7Z6G3 386 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 AMOTL1Q8IY63 956 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 TANGO6Q9C0B7 1094 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 RABGAP1Q9Y3P9 1069 aa21.63■■□□□ 1.05
CIRBP-243ENST00000593128 CYP2D7A0A087X1C5 515 aa21.62■■□□□ 1.05
CIRBP-243ENST00000593128 FXR1P51114 621 aaKnown RBP eCLIP21.62■■□□□ 1.05
CIRBP-243ENST00000593128 CCL14Q16627 93 aa21.62■■□□□ 1.05
CIRBP-243ENST00000593128 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
CIRBP-243ENST00000593128 CNMDO75829 334 aa21.61■■□□□ 1.05
CIRBP-243ENST00000593128 GLRX3O76003 335 aaKnown RBP21.61■■□□□ 1.05
CIRBP-243ENST00000593128 CLEC10AQ8IUN9 316 aa21.61■■□□□ 1.05
CIRBP-243ENST00000593128 SWAP70Q9UH65 585 aa21.61■■□□□ 1.05
CIRBP-243ENST00000593128 SLC4A4Q9Y6R1 1079 aa21.61■■□□□ 1.05
CIRBP-243ENST00000593128 CEP290O15078 2479 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 A0A1W2PRG0 241 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 XRCC5P13010 732 aaKnown RBP21.6■■□□□ 1.05
CIRBP-243ENST00000593128 AKR1B1P15121 316 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 ATP2B2Q01814 1243 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 TMEM179Q6ZVK1 233 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
CIRBP-243ENST00000593128 APBA2Q99767 749 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 ATP8A2Q9NTI2 1148 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 BTBD7Q9P203 1132 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 RBM27Q9P2N5 1060 aaKnown RBP21.6■■□□□ 1.05
CIRBP-243ENST00000593128 IVNS1ABPQ9Y6Y0 642 aa21.6■■□□□ 1.05
CIRBP-243ENST00000593128 SPDYE16A6NNV3 312 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-243ENST00000593128 CAPN2P17655 700 aa21.59■■□□□ 1.05
CIRBP-243ENST00000593128 CACNB2Q08289 660 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-243ENST00000593128 MORN1Q5T089 497 aa21.59■■□□□ 1.05
CIRBP-243ENST00000593128 C7orf61Q8IZ16 206 aa21.59■■□□□ 1.05
CIRBP-243ENST00000593128 ARHGEF10LQ9HCE6 1279 aa21.59■■□□□ 1.05
CIRBP-243ENST00000593128 ALPK3Q96L96 1907 aa21.59■■□□□ 1.05
CIRBP-243ENST00000593128 USP17L12C9JPN9 530 aa21.58■■□□□ 1.05
CIRBP-243ENST00000593128 USP17L21D6R901 530 aa21.58■■□□□ 1.05
CIRBP-243ENST00000593128 SMIM22K7EJ46 135 aa21.58■■□□□ 1.05
CIRBP-243ENST00000593128 RAD21O60216 631 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms