RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 DIAPH3Q9NSV4 1193 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 C19orf81C9J6K1 198 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 USP17L10C9JJH3 530 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 CAP1Q01518 475 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 TMEM179Q6ZVK1 233 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 PROCA1Q8NCQ7 364 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-206ENST00000592942 ZFYVE28Q9HCC9 887 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
TRIM47-206ENST00000592942 ADGRA2Q96PE1 1338 aa18.26■□□□□ 0.51
TRIM47-206ENST00000592942 MPHOSPH10O00566 681 aaKnown RBP18.26■□□□□ 0.51
TRIM47-206ENST00000592942 TLR2O60603 784 aa18.26■□□□□ 0.51
TRIM47-206ENST00000592942 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
TRIM47-206ENST00000592942 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
TRIM47-206ENST00000592942 PRDM1O75626 825 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 FGRP09769 529 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 CYP2C8P10632 490 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 CTDSPL2Q05D32 466 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 KIAA1683Q9H0B3 1180 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 MKNK2Q9HBH9 465 aa18.25■□□□□ 0.51
TRIM47-206ENST00000592942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRIM47-206ENST00000592942 ZMYM6O95789 1325 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 FKTNO75072 461 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-206ENST00000592942 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 C12orf42Q96LP6 360 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 NBPF3Q9H094 633 aa18.24■□□□□ 0.51
TRIM47-206ENST00000592942 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
TRIM47-206ENST00000592942 BMP2KLQ5H9B9 411 aa18.23■□□□□ 0.51
TRIM47-206ENST00000592942 NKX2-3Q8TAU0 364 aa18.23■□□□□ 0.51
TRIM47-206ENST00000592942 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 MYH8P13535 1937 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 GREB1LQ9C091 1923 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-206ENST00000592942 BCRP11274 1271 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
TRIM47-206ENST00000592942 RGS19P49795 217 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 SP3Q02447 781 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-206ENST00000592942 DSCC1Q9BVC3 393 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
TRIM47-206ENST00000592942 SGSM2O43147 1006 aa18.21■□□□□ 0.51
TRIM47-206ENST00000592942 MLLT1Q03111 559 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-206ENST00000592942 PDE4BQ07343 736 aa18.21■□□□□ 0.51
TRIM47-206ENST00000592942 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
TRIM47-206ENST00000592942 FAM47AQ5JRC9 791 aa18.21■□□□□ 0.51
TRIM47-206ENST00000592942 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
TRIM47-206ENST00000592942 PARK7Q99497 189 aaKnown RBP18.21■□□□□ 0.51
TRIM47-206ENST00000592942 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-206ENST00000592942 CCDC85CA6NKD9 419 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 ORC4O43929 436 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 SLC3A2P08195 630 aaKnown RBP18.2■□□□□ 0.5
TRIM47-206ENST00000592942 CTGFP29279 349 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 USP14P54578 494 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 HAND2P61296 217 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 PTH1RQ03431 593 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 ICA1Q05084 483 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
TRIM47-206ENST00000592942 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 RAD50Q92878 1312 aa18.2■□□□□ 0.5
TRIM47-206ENST00000592942 TFAP4Q01664 338 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 CD99L2Q8TCZ2 262 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 MKL1Q969V6 931 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 FEZ1Q99689 392 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 NYAP2Q9P242 653 aa18.19■□□□□ 0.5
TRIM47-206ENST00000592942 VCAM1P19320 739 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 OSBPP22059 807 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRIM47-206ENST00000592942 CTU1Q7Z7A3 348 aaKnown RBP18.18■□□□□ 0.5
TRIM47-206ENST00000592942 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 ARHGAP39Q9C0H5 1083 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 ARHGEF10LQ9HCE6 1279 aa18.18■□□□□ 0.5
TRIM47-206ENST00000592942 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L15C9J2P7 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L13C9JLJ4 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L11C9JVI0 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L18D6R9N7 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L22D6RA61 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L17D6RBQ6 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L19D6RCP7 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L20D6RJB6 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 ZNF213O14771 459 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 NOVP48745 357 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 LACTBP83111 547 aaPredicted RBP18.17■□□□□ 0.5
TRIM47-206ENST00000592942 USP17L24Q0WX57 530 aa18.17■□□□□ 0.5
TRIM47-206ENST00000592942 AKNAD1Q5T1N1 836 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms