RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ERC2O15083 957 aa24.27■■□□□ 1.48
CIRBP-239ENST00000592467 ZFYP08048 801 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-239ENST00000592467 MORF4L1Q9UBU8 362 aa24.27■■□□□ 1.48
CIRBP-239ENST00000592467 STAP2Q9UGK3 403 aa24.27■■□□□ 1.48
CIRBP-239ENST00000592467 GREB1LQ9C091 1923 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-239ENST00000592467 A0A1W2PRG0 241 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 M0R2C6 588 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 HOXD10P28358 340 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 C16orf86Q6ZW13 317 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 SIAH1Q8IUQ4 282 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 SMC5Q8IY18 1101 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 CABP5Q9NP86 173 aa24.26■■□□□ 1.47
CIRBP-239ENST00000592467 PEX10O60683 326 aa24.25■■□□□ 1.47
CIRBP-239ENST00000592467 IGHDP01880 384 aa24.25■■□□□ 1.47
CIRBP-239ENST00000592467 HERVK_113P62684 666 aa24.25■■□□□ 1.47
CIRBP-239ENST00000592467 EPB41L4AQ9HCS5 686 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-239ENST00000592467 TXNRD2Q9NNW7 524 aa24.25■■□□□ 1.47
CIRBP-239ENST00000592467 RLFQ13129 1914 aa24.25■■□□□ 1.47
CIRBP-239ENST00000592467 GPAA1O43292 621 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 AKR1B1P15121 316 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 CDK8P49336 464 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 ZYXQ15942 572 aaKnown RBP24.24■■□□□ 1.47
CIRBP-239ENST00000592467 SBK1Q52WX2 424 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 NBPF11Q86T75 865 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 SEC62Q99442 399 aaKnown RBP24.24■■□□□ 1.47
CIRBP-239ENST00000592467 RBPJLQ9UBG7 517 aa24.24■■□□□ 1.47
CIRBP-239ENST00000592467 PDE1AP54750 535 aa24.23■■□□□ 1.47
CIRBP-239ENST00000592467 IRX3P78415 501 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-239ENST00000592467 GIMAP6Q6P9H5 292 aa24.23■■□□□ 1.47
CIRBP-239ENST00000592467 TMEM179Q6ZVK1 233 aa24.23■■□□□ 1.47
CIRBP-239ENST00000592467 SUPT16HQ9Y5B9 1047 aaKnown RBP24.23■■□□□ 1.47
CIRBP-239ENST00000592467 ROBO3Q96MS0 1386 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 TNPO2O14787 897 aaKnown RBP24.22■■□□□ 1.47
CIRBP-239ENST00000592467 VCAM1P19320 739 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 GRK4P32298 578 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 FLT3LGP49771 235 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 USP14P54578 494 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 ZMYM1Q5SVZ6 1142 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 RAET1EQ8TD07 263 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 FEZ1Q99689 392 aa24.22■■□□□ 1.47
CIRBP-239ENST00000592467 ARPP21Q9UBL0 812 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-239ENST00000592467 MPHOSPH10O00566 681 aaKnown RBP24.21■■□□□ 1.47
CIRBP-239ENST00000592467 EN2P19622 333 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-239ENST00000592467 IRF5Q13568 498 aa24.21■■□□□ 1.47
CIRBP-239ENST00000592467 KIAA1755Q5JYT7 1200 aa24.21■■□□□ 1.47
CIRBP-239ENST00000592467 CATSPERGQ6ZRH7 1159 aa24.21■■□□□ 1.47
CIRBP-239ENST00000592467 CLEC10AQ8IUN9 316 aa24.21■■□□□ 1.47
CIRBP-239ENST00000592467 PARP14Q460N5 1801 aa24.21■■□□□ 1.47
CIRBP-239ENST00000592467 USP17L15C9J2P7 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L13C9JLJ4 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L11C9JVI0 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L18D6R9N7 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L22D6RA61 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L17D6RBQ6 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L19D6RCP7 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L20D6RJB6 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 CNMDO75829 334 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 USP17L24Q0WX57 530 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 MTFR1Q15390 333 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 Q3C1V9 767 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 DDRGK1Q96HY6 314 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 CCDC17Q96LX7 622 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 FSD1Q9BTV5 496 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.2■■□□□ 1.46
CIRBP-239ENST00000592467 RWDD1Q9H446 243 aaPredicted RBP24.2■■□□□ 1.46
CIRBP-239ENST00000592467 GJD2Q9UKL4 321 aa24.2■■□□□ 1.46
CIRBP-239ENST00000592467 A0A0G2JMZ2 1700 aa24.19■■□□□ 1.46
CIRBP-239ENST00000592467 FOXP2O15409 715 aa24.19■■□□□ 1.46
CIRBP-239ENST00000592467 LNPKQ9C0E8 428 aa24.19■■□□□ 1.46
CIRBP-239ENST00000592467 PATL2C9JE40 543 aaKnown RBP24.18■■□□□ 1.46
CIRBP-239ENST00000592467 MYCP01106 439 aaPredicted RBP24.18■■□□□ 1.46
CIRBP-239ENST00000592467 GNAT2P19087 354 aa24.18■■□□□ 1.46
CIRBP-239ENST00000592467 LRRFIP1Q32MZ4 808 aaKnown RBP24.18■■□□□ 1.46
CIRBP-239ENST00000592467 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
CIRBP-239ENST00000592467 SLAIN1Q8ND83 568 aa24.18■■□□□ 1.46
CIRBP-239ENST00000592467 PXYLP1Q8TE99 480 aa24.18■■□□□ 1.46
CIRBP-239ENST00000592467 TMX2Q9Y320 296 aa24.18■■□□□ 1.46
CIRBP-239ENST00000592467 PDE4DIPQ5VU43 2346 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 ADCY3O60266 1144 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 ERVK-9P63128 1117 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 ERVK-24P63145 666 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 LBX2Q6XYB7 198 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 IFNL3Q8IZI9 196 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 GPRC5AQ8NFJ5 357 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 GTF3C2Q8WUA4 911 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-239ENST00000592467 COA7Q96BR5 231 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 TMEM106CQ9BVX2 250 aa24.17■■□□□ 1.46
CIRBP-239ENST00000592467 RPAP3Q9H6T3 665 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-239ENST00000592467 ELNP15502 786 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 RASA1P20936 1047 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 NUCB1Q02818 461 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 ICA1Q05084 483 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 EVI5LQ96CN4 794 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 PORCNQ9H237 461 aa24.16■■□□□ 1.46
CIRBP-239ENST00000592467 ZBTB47Q9UFB7 747 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-239ENST00000592467 SPDYE16A6NNV3 312 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-239ENST00000592467 B4GALNT3Q6L9W6 998 aa24.15■■□□□ 1.46
CIRBP-239ENST00000592467 RABGAP1Q9Y3P9 1069 aa24.15■■□□□ 1.46
CIRBP-239ENST00000592467 MINDY4BA8MYZ0 360 aa24.14■■□□□ 1.45
CIRBP-239ENST00000592467 CCDC129Q6ZRS4 1044 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms