RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 GUCD1Q96NT3 240 aa24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 FLRT1Q9NZU1 646 aa24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 DDX20Q9UHI6 824 aaKnown RBP24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 MAST2Q6P0Q8 1798 aa24.02■■□□□ 1.44
PRKCSH-216ENST00000592445 SLC15A5A6NIM6 579 aa24.02■■□□□ 1.44
PRKCSH-216ENST00000592445 CNMDO75829 334 aa24.02■■□□□ 1.44
PRKCSH-216ENST00000592445 CYP2E1P05181 493 aaPredicted RBP24.02■■□□□ 1.44
PRKCSH-216ENST00000592445 IVNS1ABPQ9Y6Y0 642 aa24.02■■□□□ 1.44
PRKCSH-216ENST00000592445 MSCO60682 206 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 PTPREP23469 700 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 USP14P54578 494 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 OS9Q13438 667 aaPredicted RBP24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 RAB3GAP1Q15042 981 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 LPAR1Q92633 364 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 C12orf42Q96LP6 360 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 DBNDD2Q9BQY9 259 aa24.01■■□□□ 1.43
PRKCSH-216ENST00000592445 DYNLL1P63167 89 aaKnown RBP24■■□□□ 1.43
PRKCSH-216ENST00000592445 TNNI3KQ59H18 835 aa24■■□□□ 1.43
PRKCSH-216ENST00000592445 ZNF697Q5TEC3 545 aa24■■□□□ 1.43
PRKCSH-216ENST00000592445 CATSPERGQ6ZRH7 1159 aa24■■□□□ 1.43
PRKCSH-216ENST00000592445 FPGT-TNNI3KV9GXZ4 949 aa24■■□□□ 1.43
PRKCSH-216ENST00000592445 DNM1LO00429 736 aa23.99■■□□□ 1.43
PRKCSH-216ENST00000592445 CYP7A1P22680 504 aa23.99■■□□□ 1.43
PRKCSH-216ENST00000592445 USP5P45974 858 aa23.99■■□□□ 1.43
PRKCSH-216ENST00000592445 GPR108Q9NPR9 543 aa23.99■■□□□ 1.43
PRKCSH-216ENST00000592445 CDK5RAP2Q96SN8 1893 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 IPO8O15397 1037 aaKnown RBP23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 IGSF3O75054 1194 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 CYP2C19P33261 490 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 ZAP70P43403 619 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 RTP1P59025 263 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 TATDN1Q6P1N9 297 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 PIH1D3Q9NQM4 214 aaKnown RBP23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 FOCADQ5VW36 1801 aa23.98■■□□□ 1.43
PRKCSH-216ENST00000592445 HOXC6P09630 235 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 VCAM1P19320 739 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 GRB14Q14449 540 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 CERKLQ49MI3 558 aaPredicted RBP23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 FRMPD3Q5JV73 1810 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 MIGA1Q8NAN2 632 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 NPLOC4Q8TAT6 608 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 KIAA1683Q9H0B3 1180 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 BTBD7Q9P203 1132 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 SERPINB13Q9UIV8 391 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 ATP11BQ9Y2G3 1177 aa23.97■■□□□ 1.43
PRKCSH-216ENST00000592445 ABCB5Q2M3G0 1257 aa23.96■■□□□ 1.43
PRKCSH-216ENST00000592445 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
PRKCSH-216ENST00000592445 CABP5Q9NP86 173 aa23.96■■□□□ 1.43
PRKCSH-216ENST00000592445 IDH1O75874 414 aaKnown RBP23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 TRIM27P14373 513 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 GJC2Q5T442 439 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 DPP9Q86TI2 863 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 CERS3Q8IU89 383 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 ARRDC4Q8NCT1 418 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 TRPV1Q8NER1 839 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 FRAT1Q92837 279 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 ZNF512BQ96KM6 892 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 EHD4Q9H223 541 aa23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 RPAP3Q9H6T3 665 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-216ENST00000592445 LBX2Q6XYB7 198 aa23.94■■□□□ 1.42
PRKCSH-216ENST00000592445 TTC6Q86TZ1 520 aa23.94■■□□□ 1.42
PRKCSH-216ENST00000592445 CLUAP1Q96AJ1 413 aa23.94■■□□□ 1.42
PRKCSH-216ENST00000592445 PRDM5Q9NQX1 630 aaPredicted RBP23.94■■□□□ 1.42
PRKCSH-216ENST00000592445 EYSQ5T1H1 3165 aa23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 SPDYE16A6NNV3 312 aaPredicted RBP23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 MYCNP04198 464 aaPredicted RBP23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 CDX2Q99626 313 aaPredicted RBP23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 TNNQ9UQP3 1299 aa23.93■■□□□ 1.42
PRKCSH-216ENST00000592445 VCANP13611 3396 aa23.92■■□□□ 1.42
PRKCSH-216ENST00000592445 KBTBD13C9JR72 458 aa23.92■■□□□ 1.42
PRKCSH-216ENST00000592445 CYBAP13498 195 aa23.92■■□□□ 1.42
PRKCSH-216ENST00000592445 SHHQ15465 462 aa23.92■■□□□ 1.42
PRKCSH-216ENST00000592445 MAGEB6Q8N7X4 407 aa23.92■■□□□ 1.42
PRKCSH-216ENST00000592445 MYH1P12882 1939 aa23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 POLA2Q14181 598 aa23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 ANO1Q5XXA6 986 aa23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 SLC39A5Q6ZMH5 540 aa23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 DBNLQ9UJU6 430 aaKnown RBP23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 MYO5AQ9Y4I1 1855 aaKnown RBP23.91■■□□□ 1.42
PRKCSH-216ENST00000592445 STRNO43815 780 aa23.9■■□□□ 1.42
PRKCSH-216ENST00000592445 ADORA2AP29274 412 aa23.9■■□□□ 1.42
PRKCSH-216ENST00000592445 OLFML2BQ68BL8 750 aa23.9■■□□□ 1.42
PRKCSH-216ENST00000592445 SEMA6BQ9H3T3 888 aa23.9■■□□□ 1.42
PRKCSH-216ENST00000592445 BCAR3O75815 825 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 SHMT1P34896 483 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 C9orf50Q5SZB4 431 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 MAFAQ8NHW3 353 aaPredicted RBP23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 SSH3Q8TE77 659 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 BADQ92934 168 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 MOV10L1Q9BXT6 1211 aaKnown RBP23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 CCDC8Q9H0W5 538 aaPredicted RBP23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 HOXC10Q9NYD6 342 aa23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 TLR7Q9NYK1 1049 aaKnown RBP23.89■■□□□ 1.41
PRKCSH-216ENST00000592445 POLR3DP05423 398 aaPredicted RBP23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 PLCD1P51178 756 aa23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 ATP8B2P98198 1209 aa23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 MAP3K12Q12852 859 aa23.88■■□□□ 1.41
PRKCSH-216ENST00000592445 COG2Q14746 738 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms