RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-210ENST00000592361 DEFB118Q96PH6 123 aa20.58■□□□□ 0.89
MBD3-210ENST00000592361 P2RX7Q99572 595 aaKnown RBP20.58■□□□□ 0.89
MBD3-210ENST00000592361 LRRCC1Q9C099 1032 aa20.58■□□□□ 0.89
MBD3-210ENST00000592361 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.89
MBD3-210ENST00000592361 PAK6Q9NQU5 681 aaPredicted RBP20.58■□□□□ 0.89
MBD3-210ENST00000592361 SWAP70Q9UH65 585 aa20.58■□□□□ 0.89
MBD3-210ENST00000592361 ATP5JP18859 108 aa20.57■□□□□ 0.88
MBD3-210ENST00000592361 ERVK-9P63128 1117 aa20.57■□□□□ 0.88
MBD3-210ENST00000592361 ERVK-24P63145 666 aa20.57■□□□□ 0.88
MBD3-210ENST00000592361 GPATCH3Q96I76 525 aa20.57■□□□□ 0.88
MBD3-210ENST00000592361 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
MBD3-210ENST00000592361 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.57■□□□□ 0.883e-14■■■□□ 15.8
MBD3-210ENST00000592361 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
MBD3-210ENST00000592361 FRMPD3Q5JV73 1810 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
MBD3-210ENST00000592361 JAG1P78504 1218 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 ZYXQ15942 572 aaKnown RBP20.56■□□□□ 0.88
MBD3-210ENST00000592361 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 EMILIN3Q9NT22 766 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
MBD3-210ENST00000592361 RPTORQ8N122 1335 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 XRCC5P13010 732 aaKnown RBP20.55■□□□□ 0.88
MBD3-210ENST00000592361 SHMT1P34896 483 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 RGS2P41220 211 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 ALPK3Q96L96 1907 aa20.55■□□□□ 0.88
MBD3-210ENST00000592361 H0YGN5 161 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 ZKSCAN1P17029 563 aaPredicted RBP20.54■□□□□ 0.88
MBD3-210ENST00000592361 VCAM1P19320 739 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 PLCD1P51178 756 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
MBD3-210ENST00000592361 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 HAUS7Q99871 368 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 DCP1AQ9NPI6 582 aaPredicted RBP20.54■□□□□ 0.88
MBD3-210ENST00000592361 GJD2Q9UKL4 321 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 IVNS1ABPQ9Y6Y0 642 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
MBD3-210ENST00000592361 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 TCRBV5S4A2TA0A5A2 114 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 ADD2P35612 726 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 TMEM179Q6ZVK1 233 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 PLEKHH3Q7Z736 793 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 LCORLQ8N3X6 602 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 SDR42E1Q8WUS8 393 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 APBA2Q99767 749 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 RBPJLQ9UBG7 517 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 ZNF236Q9UL36 1845 aa20.53■□□□□ 0.88
MBD3-210ENST00000592361 MBD4O95243 580 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 CYP2B6P20813 491 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 GABPAQ06546 454 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 ARMT1Q9H993 441 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 TXNRD2Q9NNW7 524 aa20.52■□□□□ 0.88
MBD3-210ENST00000592361 EVI5O60447 810 aa20.51■□□□□ 0.87
MBD3-210ENST00000592361 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
MBD3-210ENST00000592361 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
MBD3-210ENST00000592361 LBX2Q6XYB7 198 aa20.51■□□□□ 0.87
MBD3-210ENST00000592361 CATSPERGQ6ZRH7 1159 aa20.51■□□□□ 0.87
MBD3-210ENST00000592361 TRIB2Q92519 343 aa20.51■□□□□ 0.87
MBD3-210ENST00000592361 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
MBD3-210ENST00000592361 PRKAR2AP13861 404 aaKnown RBP20.5■□□□□ 0.87
MBD3-210ENST00000592361 SEPT2Q15019 361 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 LPAR1Q92633 364 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 CCDC17Q96LX7 622 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 COLQQ9Y215 455 aaPredicted RBP20.5■□□□□ 0.87
MBD3-210ENST00000592361 MYH4Q9Y623 1939 aa20.5■□□□□ 0.87
MBD3-210ENST00000592361 COL11A1P12107 1806 aaPredicted RBP20.5■□□□□ 0.87
MBD3-210ENST00000592361 EDC3Q96F86 508 aaKnown RBP20.49■□□□□ 0.87
MBD3-210ENST00000592361 HOXC10Q9NYD6 342 aa20.49■□□□□ 0.87
MBD3-210ENST00000592361 RLFQ13129 1914 aa20.49■□□□□ 0.87
MBD3-210ENST00000592361 ZNFX1Q9P2E3 1918 aaKnown RBP20.49■□□□□ 0.87
MBD3-210ENST00000592361 ICA1Q05084 483 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 CHRDL2Q6WN34 429 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 MB21D1Q8N884 522 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 ACER1Q8TDN7 264 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 PORCNQ9H237 461 aa20.48■□□□□ 0.87
MBD3-210ENST00000592361 ARPP21Q9UBL0 812 aaPredicted RBP20.48■□□□□ 0.87
MBD3-210ENST00000592361 SLC15A5A6NIM6 579 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 MAP2K5Q13163 448 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 COG2Q14746 738 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 MORN1Q5T089 497 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 MAP3K21Q5TCX8 1036 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 MFSD14CQ5VZR4 134 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 PAWRQ96IZ0 340 aaKnown RBP20.47■□□□□ 0.87
MBD3-210ENST00000592361 SLC4A4Q9Y6R1 1079 aa20.47■□□□□ 0.87
MBD3-210ENST00000592361 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
MBD3-210ENST00000592361 Q3C1V9 767 aa20.46■□□□□ 0.87
MBD3-210ENST00000592361 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
MBD3-210ENST00000592361 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
MBD3-210ENST00000592361 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms