RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 GRIN1Q05586 938 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 NPY5RQ15761 445 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 ELOA2Q8IYF1 753 aaPredicted RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 SRBD1Q8N5C6 995 aaKnown RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 BIN1O00499 593 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 USP5P45974 858 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 ZRSR1Q15695 479 aaKnown RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 CCDC144BQ3MJ40 725 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 FOCADQ5VW36 1801 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 CTCFLQ8NI51 663 aaPredicted RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 TNFRSF25Q93038 417 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 NRXN2Q9P2S2 1712 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 TSPY2A6NKD2 308 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
MBD1-227ENST00000592060 LONRF3Q496Y0 759 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
MBD1-227ENST00000592060 CABP5Q9NP86 173 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
MBD1-227ENST00000592060 BAG3O95817 575 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 LDHCP07864 332 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 PNOCQ13519 176 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 NCAPHQ15003 741 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
MBD1-227ENST00000592060 SRPRBQ9Y5M8 271 aaKnown RBP18.1■□□□□ 0.49
MBD1-227ENST00000592060 BBOX1O75936 387 aa18.09■□□□□ 0.49
MBD1-227ENST00000592060 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
MBD1-227ENST00000592060 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
MBD1-227ENST00000592060 CRAMP1Q96RY5 1269 aa18.09■□□□□ 0.49
MBD1-227ENST00000592060 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
MBD1-227ENST00000592060 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.49
MBD1-227ENST00000592060 TFAP4Q01664 338 aa18.08■□□□□ 0.49
MBD1-227ENST00000592060 LRMPQ12912 555 aa18.08■□□□□ 0.49
MBD1-227ENST00000592060 SPECC1Q5M775 1068 aa18.08■□□□□ 0.49
MBD1-227ENST00000592060 KRT27Q7Z3Y8 459 aa18.08■□□□□ 0.49
MBD1-227ENST00000592060 MYH1P12882 1939 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 TRIM75PA6NK02 468 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 TRIM37O94972 964 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 CERS3Q8IU89 383 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 CNNM3Q8NE01 707 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 NOL10Q9BSC4 688 aaKnown RBP18.08■□□□□ 0.48
MBD1-227ENST00000592060 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
MBD1-227ENST00000592060 SNED1Q8TER0 1413 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 QSER1Q2KHR3 1735 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 IKBKBO14920 756 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 SCG2P13521 617 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 FOXP4Q8IVH2 680 aaPredicted RBP18.07■□□□□ 0.48
MBD1-227ENST00000592060 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
MBD1-227ENST00000592060 POLLQ9UGP5 575 aa18.07■□□□□ 0.48
MBD1-227ENST00000592060 GPR75-ASB3A0A0A6YYF3 556 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 WNT7AO00755 349 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 BTDP43251 543 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
MBD1-227ENST00000592060 PROM2Q8N271 834 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 KAT14Q9H8E8 782 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 TCP11L1Q9NUJ3 509 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 SMTNL1A8MU46 457 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 ATP2B1P20020 1258 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 KIF5BP33176 963 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 NOM1Q5C9Z4 860 aaKnown RBP18.06■□□□□ 0.48
MBD1-227ENST00000592060 CSRNP2Q9H175 543 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 HSD3B7Q9H2F3 369 aa18.06■□□□□ 0.48
MBD1-227ENST00000592060 GAKO14976 1311 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 BAZ2BQ9UIF8 2168 aaKnown RBP18.05■□□□□ 0.48
MBD1-227ENST00000592060 FOXN1O15353 648 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 GRM4Q14833 912 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 CCDC178Q5BJE1 867 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 ISM2Q6H9L7 571 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 MAPKAPK5Q8IW41 473 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 AMOTL1Q8IY63 956 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 PNMA1Q8ND90 353 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 FAM163AQ96GL9 167 aaPredicted RBP18.05■□□□□ 0.48
MBD1-227ENST00000592060 PCDHA5Q9Y5H7 936 aa18.05■□□□□ 0.48
MBD1-227ENST00000592060 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
MBD1-227ENST00000592060 ACTN4O43707 911 aaKnown RBP18.04■□□□□ 0.48
MBD1-227ENST00000592060 BMP15O95972 392 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 RASA1P20936 1047 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 PLCD1P51178 756 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 TXNRD1Q16881 649 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 SLC44A5Q8NCS7 719 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 SERTAD1Q9UHV2 236 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 FAM205AQ6ZU69 1335 aa18.04■□□□□ 0.48
MBD1-227ENST00000592060 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
MBD1-227ENST00000592060 VEGFAP15692 232 aaPredicted RBP18.04■□□□□ 0.48
MBD1-227ENST00000592060 NT5DC1Q5TFE4 455 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms