RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CLIP2Q9UDT6 1046 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 KLRG2A4D1S0 409 aaPredicted RBP22.66■■□□□ 1.22
MBD3-209ENST00000592012 SPTLC3Q9NUV7 552 aa22.66■■□□□ 1.22
MBD3-209ENST00000592012 PYCARDQ9ULZ3 195 aa22.66■■□□□ 1.22
MBD3-209ENST00000592012 CNTNAP5Q8WYK1 1306 aa22.66■■□□□ 1.22
MBD3-209ENST00000592012 NT5C2P49902 561 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 TFAP4Q01664 338 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 GRIN1Q05586 938 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 TGFBRAP1Q8WUH2 860 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 DYNLL2Q96FJ2 89 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 RTFDC1Q9BY42 306 aaPredicted RBP22.65■■□□□ 1.22
MBD3-209ENST00000592012 IL17RBQ9NRM6 502 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 POLLQ9UGP5 575 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 R3HCC1Q9Y3T6 440 aaKnown RBP22.65■■□□□ 1.22
MBD3-209ENST00000592012 BRWD3Q6RI45 1802 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 KRT2P35908 639 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 EARS2Q5JPH6 523 aaKnown RBP22.65■■□□□ 1.22
MBD3-209ENST00000592012 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 CRAMP1Q96RY5 1269 aa22.65■■□□□ 1.22
MBD3-209ENST00000592012 ROBO3Q96MS0 1386 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 TERF1P54274 439 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 KRBA2Q6ZNG9 492 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 DGKHQ86XP1 1220 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 ZNF579Q8NAF0 562 aaKnown RBP22.64■■□□□ 1.22
MBD3-209ENST00000592012 TBC1D16Q8TBP0 767 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.22
MBD3-209ENST00000592012 CEP131Q9UPN4 1083 aa22.64■■□□□ 1.22
MBD3-209ENST00000592012 SRPRBQ9Y5M8 271 aaKnown RBP22.64■■□□□ 1.22
MBD3-209ENST00000592012 ATP2B1P20020 1258 aa22.64■■□□□ 1.21
MBD3-209ENST00000592012 NPY5RQ15761 445 aa22.64■■□□□ 1.21
MBD3-209ENST00000592012 NOL10Q9BSC4 688 aaKnown RBP22.64■■□□□ 1.21
MBD3-209ENST00000592012 FAM205CA6NFA0 338 aa22.63■■□□□ 1.21
MBD3-209ENST00000592012 PNOCQ13519 176 aa22.63■■□□□ 1.21
MBD3-209ENST00000592012 TXNRD1Q16881 649 aa22.63■■□□□ 1.21
MBD3-209ENST00000592012 METTL16Q86W50 562 aaKnown RBP22.63■■□□□ 1.21
MBD3-209ENST00000592012 ELOA2Q8IYF1 753 aaPredicted RBP22.63■■□□□ 1.21
MBD3-209ENST00000592012 ANKS1AQ92625 1134 aa22.63■■□□□ 1.21
MBD3-209ENST00000592012 CNNM3Q8NE01 707 aa22.63■■□□□ 1.21
MBD3-209ENST00000592012 MORC2Q9Y6X9 1032 aaPredicted RBP22.63■■□□□ 1.21
MBD3-209ENST00000592012 GPR75-ASB3A0A0A6YYF3 556 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 PLCD1P51178 756 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 FOXP4Q8IVH2 680 aaPredicted RBP22.62■■□□□ 1.21
MBD3-209ENST00000592012 MKNK2Q9HBH9 465 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 MDM2Q00987 491 aaPredicted RBP22.62■■□□□ 1.21
MBD3-209ENST00000592012 CCDC144BQ3MJ40 725 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 ISM2Q6H9L7 571 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 CERS3Q8IU89 383 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 AMOTL1Q8IY63 956 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 TNFRSF25Q93038 417 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 KAT14Q9H8E8 782 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 FAM13BQ9NYF5 915 aa22.62■■□□□ 1.21
MBD3-209ENST00000592012 TRIM75PA6NK02 468 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 BTDP43251 543 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 SCG2P13521 617 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 KIF5BP33176 963 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 LRMPQ12912 555 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 NCAPHQ15003 741 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 BRMS1Q9HCU9 246 aa22.61■■□□□ 1.21
MBD3-209ENST00000592012 VEGFAP15692 232 aaPredicted RBP22.6■■□□□ 1.21
MBD3-209ENST00000592012 PFKFB3Q16875 520 aaPredicted RBP22.6■■□□□ 1.21
MBD3-209ENST00000592012 MFSD14BQ5SR56 506 aa22.6■■□□□ 1.21
MBD3-209ENST00000592012 PNMA1Q8ND90 353 aa22.6■■□□□ 1.21
MBD3-209ENST00000592012 FAM163AQ96GL9 167 aaPredicted RBP22.6■■□□□ 1.21
MBD3-209ENST00000592012 TCP11L1Q9NUJ3 509 aa22.6■■□□□ 1.21
MBD3-209ENST00000592012 CDK5RAP2Q96SN8 1893 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 USP17L3A6NCW0 530 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 USP17L4A6NCW7 530 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 POLR2DO15514 142 aaKnown RBP22.59■■□□□ 1.21
MBD3-209ENST00000592012 TPM2P07951 284 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 USP17L1Q7RTZ2 530 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 SLC44A5Q8NCS7 719 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 CSRNP2Q9H175 543 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 SAP30BPQ9UHR5 308 aaKnown RBP22.59■■□□□ 1.21
MBD3-209ENST00000592012 PCDHA5Q9Y5H7 936 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 NAV1Q8NEY1 1877 aa22.59■■□□□ 1.21
MBD3-209ENST00000592012 C6orf229H3BNL8 230 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 TSPY3P0CV98 308 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 TSPY8P0CW00 308 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 CCDC178Q5BJE1 867 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 NOM1Q5C9Z4 860 aaKnown RBP22.58■■□□□ 1.21
MBD3-209ENST00000592012 SP8Q8IXZ3 490 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 ZNF444Q8N0Y2 327 aaPredicted RBP22.58■■□□□ 1.21
MBD3-209ENST00000592012 CACTINQ8WUQ7 758 aaKnown RBP22.58■■□□□ 1.21
MBD3-209ENST00000592012 SMTNL1A8MU46 457 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 WNT7AO00755 349 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 IKBKBO14920 756 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 FOXN1O15353 648 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 TMC4Q7Z404 712 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 TBC1D22AQ8WUA7 517 aa22.58■■□□□ 1.21
MBD3-209ENST00000592012 USP49Q70CQ1 688 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 LTBP1Q14766 1721 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 RASA1P20936 1047 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 RHBDL3P58872 404 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 DNTTIP2Q5QJE6 756 aaKnown RBP22.57■■□□□ 1.2
MBD3-209ENST00000592012 TEX11Q8IYF3 940 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 STAG2Q8N3U4 1231 aa22.57■■□□□ 1.2
MBD3-209ENST00000592012 FAM205AQ6ZU69 1335 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 PLCG2P16885 1265 aa22.56■■□□□ 1.2
MBD3-209ENST00000592012 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms