RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 SCLT1Q96NL6 688 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 SLC39A2Q9NP94 309 aa13.77□□□□□ -0.21
SMARCA4-217ENST00000591595 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 CTDNEP1O95476 244 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 IQCGQ9H095 443 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 ANKZF1Q9H8Y5 726 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 CWF19L1Q69YN2 538 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
SMARCA4-217ENST00000591595 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 CABP4P57796 275 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 B4GALNT4Q76KP1 1039 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 KIAA0825Q8IV33 1275 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 C8orf76Q96K31 380 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 MAGEC3Q8TD91 643 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 PNKPQ96T60 521 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 PCDHGC5Q9Y5F6 944 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 PHKG2P15735 406 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 KCNA4P22459 653 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 CHMP4BP1P59074 171 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 MIS18BP1Q6P0N0 1132 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 HELLSQ9NRZ9 838 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 LTN1O94822 1766 aa13.75□□□□□ -0.21
SMARCA4-217ENST00000591595 TMC6Q7Z403 805 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 PARP9Q8IXQ6 854 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 CRYBG1Q9Y4K1 1723 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 SLC8A1P32418 973 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 PAPOLAP51003 745 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 EHD4Q9H223 541 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 GNG11P61952 73 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 DHX40Q8IX18 779 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
SMARCA4-217ENST00000591595 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 NFAT5O94916 1531 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 NDUFA8P51970 172 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 AKNAD1Q5T1N1 836 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 FAM228AQ86W67 206 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 SUN2Q9UH99 717 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 JCADQ9P266 1359 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 ATL3Q6DD88 541 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 FAM76AQ8TAV0 307 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 WDR24Q96S15 920 aa13.73□□□□□ -0.21
SMARCA4-217ENST00000591595 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ROR2Q01974 943 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 IMMTQ16891 758 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 LRRC24Q50LG9 513 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 ACBD5Q5T8D3 534 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 MSANTD4Q8NCY6 345 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 DHX58Q96C10 678 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 MAST3O60307 1309 aa13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-217ENST00000591595 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■□□□□ 9.5
SMARCA4-217ENST00000591595 LRRC23Q53EV4 343 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms