RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
VPS25-206ENST00000591584 PNMA1Q8ND90 353 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 CCDC34Q96HJ3 373 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 SDF4Q9BRK5 362 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.49
VPS25-206ENST00000591584 VPS33BQ9H267 617 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 ANO10Q9NW15 660 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 HOOK1Q9UJC3 728 aaKnown RBP11.96□□□□□ -0.49
VPS25-206ENST00000591584 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
VPS25-206ENST00000591584 SCG2P13521 617 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 RASA1P20936 1047 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 GUCY1A2P33402 732 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 BAG6P46379 1132 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 PLCD1P51178 756 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
VPS25-206ENST00000591584 PKN1Q16512 942 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 STX1AQ16623 288 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
VPS25-206ENST00000591584 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
VPS25-206ENST00000591584 FAM13BQ9NYF5 915 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
VPS25-206ENST00000591584 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
VPS25-206ENST00000591584 ESPNB1AK53 854 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 ZNF202O95125 648 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 PTPREP23469 700 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 ZSCAN30Q86W11 494 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
VPS25-206ENST00000591584 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
VPS25-206ENST00000591584 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 CCDC17Q96LX7 622 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 ZDHHC15Q96MV8 337 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 PYM1Q9BRP8 204 aaKnown RBP11.94□□□□□ -0.5
VPS25-206ENST00000591584 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS25-206ENST00000591584 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
VPS25-206ENST00000591584 GOLPH3LQ9H4A5 285 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
VPS25-206ENST00000591584 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 LAMB1P07942 1786 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 DLEC1Q9Y238 1755 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
VPS25-206ENST00000591584 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 SYKP43405 635 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 ZNF165P49910 485 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
VPS25-206ENST00000591584 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 RTKN2Q8IZC4 609 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
VPS25-206ENST00000591584 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 EHD4Q9H223 541 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
VPS25-206ENST00000591584 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
VPS25-206ENST00000591584 MYH15Q9Y2K3 1946 aa11.93□□□□□ -0.5
VPS25-206ENST00000591584 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 A0A1B0GVL5 298 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 PARP1P09874 1014 aaKnown RBP11.92□□□□□ -0.5
VPS25-206ENST00000591584 PFKFB1P16118 471 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 MSNP26038 577 aaKnown RBP11.92□□□□□ -0.5
VPS25-206ENST00000591584 CLCN1P35523 988 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 NDUFA8P51970 172 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 NLRP5P59047 1200 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
VPS25-206ENST00000591584 GABPAQ06546 454 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 DAGLBQ8NCG7 672 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
VPS25-206ENST00000591584 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms