RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 ZSCAN10Q96SZ4 725 aaPredicted RBP23.79■■□□□ 1.4
ZNF554-203ENST00000590116 RIOK1Q9BRS2 568 aaKnown RBP23.79■■□□□ 1.4
ZNF554-203ENST00000590116 COBLO75128 1261 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 STAMQ92783 540 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 CARD6Q9BX69 1037 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 ANAPC4Q9UJX5 808 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 PARP3Q9Y6F1 533 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 LOC102724428A0A0B4J2F2 783 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 CD44P16070 742 aaKnown RBP23.78■■□□□ 1.4
ZNF554-203ENST00000590116 PLCD1P51178 756 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 CLCN6P51797 869 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 SIK1P57059 783 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 MTF1Q14872 753 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 IFIT1BQ5T764 474 aaKnown RBP23.78■■□□□ 1.4
ZNF554-203ENST00000590116 SPATA20Q8TB22 786 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 ZNF384Q8TF68 577 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 SYMPKQ92797 1274 aaKnown RBP23.78■■□□□ 1.4
ZNF554-203ENST00000590116 DUOX1Q9NRD9 1551 aa23.78■■□□□ 1.4
ZNF554-203ENST00000590116 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
ZNF554-203ENST00000590116 TEX33O43247 280 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 KRT2P35908 639 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 FUT2Q10981 343 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 EPC1Q9H2F5 836 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 CACNA1SQ13698 1873 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 NMT2O60551 498 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 ZNF174Q15697 407 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 MNS1Q8NEH6 495 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 NOL10Q9BSC4 688 aaKnown RBP23.77■■□□□ 1.4
ZNF554-203ENST00000590116 PHF20Q9BVI0 1012 aa23.77■■□□□ 1.4
ZNF554-203ENST00000590116 AATFQ9NY61 560 aaKnown RBP eCLIP23.77■■□□□ 1.4
ZNF554-203ENST00000590116 ZNF804BA4D1E1 1349 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 STX10O60499 249 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 PPP2R5BQ15173 497 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 CATIPQ7Z7H3 387 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 UBXN4Q92575 508 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 GNG11P61952 73 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
ZNF554-203ENST00000590116 CDC5LQ99459 802 aaKnown RBP23.76■■□□□ 1.39
ZNF554-203ENST00000590116 GNL3LQ9NVN8 582 aaKnown RBP23.76■■□□□ 1.39
ZNF554-203ENST00000590116 KLRK1P26718 216 aa23.75■■□□□ 1.39
ZNF554-203ENST00000590116 GABPB1Q06547 395 aaPredicted RBP23.75■■□□□ 1.39
ZNF554-203ENST00000590116 KARSQ15046 597 aaKnown RBP23.75■■□□□ 1.39
ZNF554-203ENST00000590116 ERFEQ4G0M1 354 aa23.75■■□□□ 1.39
ZNF554-203ENST00000590116 ERCC5P28715 1186 aaPredicted RBP23.75■■□□□ 1.39
ZNF554-203ENST00000590116 SLC4A8Q2Y0W8 1093 aa23.75■■□□□ 1.39
ZNF554-203ENST00000590116 ZNF771Q7L3S4 317 aaPredicted RBP23.75■■□□□ 1.39
ZNF554-203ENST00000590116 FAM53CQ9NYF3 392 aa23.75■■□□□ 1.39
ZNF554-203ENST00000590116 PRPF3O43395 683 aaKnown RBP23.74■■□□□ 1.39
ZNF554-203ENST00000590116 NR1I3Q14994 352 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 PAGE5Q96GU1 130 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 WNK3Q9BYP7 1800 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 COL16A1Q07092 1604 aaPredicted RBP23.74■■□□□ 1.39
ZNF554-203ENST00000590116 ADAMTS3O15072 1205 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 IQCA1Q86XH1 822 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 CPLX3Q8WVH0 158 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 CCDC34Q96HJ3 373 aa23.74■■□□□ 1.39
ZNF554-203ENST00000590116 SRRTQ9BXP5 876 aaKnown RBP23.74■■□□□ 1.39
ZNF554-203ENST00000590116 SYNRGQ9UMZ2 1314 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 LAMB2P55268 1798 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 A0A0U1RQJ8 604 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 SOWAHDA6NJG2 315 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 TADA3O75528 432 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 SLFN14P0C7P3 912 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 ATRIPQ8WXE1 791 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 MYH13Q9UKX3 1938 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 A0A1B0GTH6 734 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 KCNQ4P56696 695 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 TROAPQ12815 778 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 NPY5RQ15761 445 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 FAM47AQ5JRC9 791 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 BICDL1Q6ZP65 573 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 ANKRD18AQ8IVF6 992 aa23.73■■□□□ 1.39
ZNF554-203ENST00000590116 IRX2Q9BZI1 471 aaPredicted RBP23.73■■□□□ 1.39
ZNF554-203ENST00000590116 MRPL44Q9H9J2 332 aaKnown RBP23.73■■□□□ 1.39
ZNF554-203ENST00000590116 USP17L12C9JPN9 530 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 USP17L21D6R901 530 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 KIF20AO95235 890 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 VEGFAP15692 232 aaPredicted RBP23.72■■□□□ 1.39
ZNF554-203ENST00000590116 APTXQ7Z2E3 356 aaKnown RBP23.72■■□□□ 1.39
ZNF554-203ENST00000590116 A0A1B0GUL6 1792 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 GOLGA6L9A6NEM1 432 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 CASQ1P31415 396 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 DPYDQ12882 1025 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 DDB1Q16531 1140 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 CTR9Q6PD62 1173 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 BLZF1Q9H2G9 400 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 RBM28Q9NW13 759 aaKnown RBP23.72■■□□□ 1.39
ZNF554-203ENST00000590116 JAG2Q9Y219 1238 aa23.72■■□□□ 1.39
ZNF554-203ENST00000590116 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 CAVIN4Q5BKX8 364 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 BRIP1Q9BX63 1249 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 BRMS1Q9HCU9 246 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 FHOD1Q9Y613 1164 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 CUL4BQ13620 913 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 SPATA1Q5VX52 437 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 SRBD1Q8N5C6 995 aaKnown RBP23.71■■□□□ 1.39
ZNF554-203ENST00000590116 MARCH10Q8NA82 808 aaPredicted RBP23.71■■□□□ 1.39
ZNF554-203ENST00000590116 FERMT2Q96AC1 680 aa23.71■■□□□ 1.39
ZNF554-203ENST00000590116 CNTNAP5Q8WYK1 1306 aa23.7■■□□□ 1.39
ZNF554-203ENST00000590116 SEC31AO94979 1220 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms