RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 USP17L11C9JVI0 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L18D6R9N7 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L22D6RA61 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L17D6RBQ6 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L19D6RCP7 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L20D6RJB6 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 CYP2B6P20813 491 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 ERVK-9P63128 1117 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 ERVK-24P63145 666 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L24Q0WX57 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 TRIM32Q13049 653 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 HMX1Q9NP08 348 aaPredicted RBP21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 MCM9Q9NXL9 1143 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 RPTORQ8N122 1335 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 SHMT1P34896 483 aa21.71■■□□□ 1.07
PRKCSH-211ENST00000590098 CHRDL2Q6WN34 429 aa21.71■■□□□ 1.07
PRKCSH-211ENST00000590098 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
PRKCSH-211ENST00000590098 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
PRKCSH-211ENST00000590098 DDX60LQ5H9U9 1706 aaKnown RBP21.7■■□□□ 1.06
PRKCSH-211ENST00000590098 Q3C1V9 767 aa21.7■■□□□ 1.06
PRKCSH-211ENST00000590098 TRMT44Q8IYL2 757 aaKnown RBP21.7■■□□□ 1.06
PRKCSH-211ENST00000590098 BOLA2Q9H3K6 86 aa21.7■■□□□ 1.06
PRKCSH-211ENST00000590098 PAG1Q9NWQ8 432 aa21.7■■□□□ 1.06
PRKCSH-211ENST00000590098 TCRBV5S4A2TA0A5A2 114 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 EVI5O60447 810 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 NECAB2Q7Z6G3 386 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 PLEKHH3Q7Z736 793 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 ACER1Q8TDN7 264 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 SDR42E1Q8WUS8 393 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 TRIB2Q92519 343 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 EDC3Q96F86 508 aaKnown RBP21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 PAWRQ96IZ0 340 aaKnown RBP21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 RBM27Q9P2N5 1060 aaKnown RBP21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 RABGAP1Q9Y3P9 1069 aa21.69■■□□□ 1.06
PRKCSH-211ENST00000590098 MPHOSPH10O00566 681 aaKnown RBP21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 ATP5JP18859 108 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 VCAM1P19320 739 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 CCNA1P78396 465 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 GABPAQ06546 454 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 CATSPERGQ6ZRH7 1159 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 GPR142Q7Z601 462 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 LCORLQ8N3X6 602 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 ANKLE1Q8NAG6 615 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 PORCNQ9H237 461 aa21.68■■□□□ 1.06
PRKCSH-211ENST00000590098 MYH8P13535 1937 aa21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 GLRX3O76003 335 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 ZKSCAN1P17029 563 aaPredicted RBP21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 RGS2P41220 211 aa21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 EVX2Q03828 476 aa21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 SEPT2Q15019 361 aa21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 DIS3LQ8TF46 1054 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 ARMT1Q9H993 441 aa21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 DCP1AQ9NPI6 582 aaPredicted RBP21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 RANBP2P49792 3224 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-211ENST00000590098 PRKAR2AP13861 404 aaKnown RBP21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 GUCY1A2P33402 732 aa21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 ADD2P35612 726 aa21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 HAUS7Q99871 368 aa21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 LRRCC1Q9C099 1032 aa21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 RPAP3Q9H6T3 665 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-211ENST00000590098 MYH7P12883 1935 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 MBD4O95243 580 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 MORN1Q5T089 497 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 MAP3K21Q5TCX8 1036 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 WDR78Q5VTH9 848 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 USP6NLQ92738 828 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 PRO3102Q9H379 93 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 SWAP70Q9UH65 585 aa21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
PRKCSH-211ENST00000590098 CNMDO75829 334 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 CYP2D6P10635 497 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 MNX1P50219 401 aaPredicted RBP21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 AMOTL1Q8IY63 956 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 DDRGK1Q96HY6 314 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 APBA2Q99767 749 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 NBPF3Q9H094 633 aa21.64■■□□□ 1.05
PRKCSH-211ENST00000590098 C20orf194Q5TEA3 1177 aa21.63■■□□□ 1.05
PRKCSH-211ENST00000590098 ZSCAN25Q6NSZ9 544 aa21.63■■□□□ 1.05
PRKCSH-211ENST00000590098 LBX2Q6XYB7 198 aa21.63■■□□□ 1.05
PRKCSH-211ENST00000590098 TMEM179Q6ZVK1 233 aa21.63■■□□□ 1.05
PRKCSH-211ENST00000590098 PRKAB2O43741 272 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 CACNB2Q08289 660 aaPredicted RBP21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 MAP2K5Q13163 448 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 UBE3CQ15386 1083 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 CCL14Q16627 93 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 SLFNL1Q499Z3 407 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 OGDHLQ9ULD0 1010 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 IVNS1ABPQ9Y6Y0 642 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 ALPK3Q96L96 1907 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 SZT2Q5T011 3432 aa21.62■■□□□ 1.05
PRKCSH-211ENST00000590098 A0A1W2PRG0 241 aa21.61■■□□□ 1.05
PRKCSH-211ENST00000590098 SLC15A5A6NIM6 579 aa21.61■■□□□ 1.05
PRKCSH-211ENST00000590098 SPDYE16A6NNV3 312 aaPredicted RBP21.61■■□□□ 1.05
PRKCSH-211ENST00000590098 COG2Q14746 738 aa21.61■■□□□ 1.05
PRKCSH-211ENST00000590098 DYNLL2Q96FJ2 89 aa21.61■■□□□ 1.05
PRKCSH-211ENST00000590098 TANGO6Q9C0B7 1094 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms