RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 DNAH12Q6ZR08 3092 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 PDE6AP16499 860 aa12.67□□□□□ -0.38
RETREG3-209ENST00000590035 PLCD1P51178 756 aa12.67□□□□□ -0.38
RETREG3-209ENST00000590035 EVX2Q03828 476 aa12.67□□□□□ -0.38
RETREG3-209ENST00000590035 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
RETREG3-209ENST00000590035 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-209ENST00000590035 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
RETREG3-209ENST00000590035 PAWRQ96IZ0 340 aaKnown RBP12.67□□□□□ -0.38
RETREG3-209ENST00000590035 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
RETREG3-209ENST00000590035 MAPK4P31152 587 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 IL1RAPL2Q9NP60 686 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 ZNF236Q9UL36 1845 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 COL6A3P12111 3177 aa12.66□□□□□ -0.38
RETREG3-209ENST00000590035 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 COL6A1P12109 1028 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 VCAM1P19320 739 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 USP5P45974 858 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 TTF1Q15361 905 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-209ENST00000590035 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
RETREG3-209ENST00000590035 LHX8Q68G74 356 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 KIF1BPQ96EK5 621 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 HMX1Q9NP08 348 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-209ENST00000590035 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
RETREG3-209ENST00000590035 PARP14Q460N5 1801 aa12.65□□□□□ -0.39
RETREG3-209ENST00000590035 PFASO15067 1338 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 HOXC6P09630 235 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 CYP2B6P20813 491 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP14P54578 494 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 CACNB2Q08289 660 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 NECAB2Q7Z6G3 386 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 GDF15Q99988 308 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 TRIM34Q9BYJ4 488 aa12.64□□□□□ -0.39
RETREG3-209ENST00000590035 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-209ENST00000590035 ZNF532Q9HCE3 1301 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 EVI5O60447 810 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 MS4A1P11836 297 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 BMP8BP34820 402 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 RGS2P41220 211 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 CCL14Q16627 93 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
RETREG3-209ENST00000590035 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
RETREG3-209ENST00000590035 APBA2Q99767 749 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 DDX19BQ9UMR2 479 aa12.63□□□□□ -0.39
RETREG3-209ENST00000590035 MYH7P12883 1935 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
RETREG3-209ENST00000590035 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 RAB11FIP3O75154 756 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-209ENST00000590035 ATP5JP18859 108 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 GRB14Q14449 540 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 SEPT2Q15019 361 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
RETREG3-209ENST00000590035 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 FLRT1Q9NZU1 646 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-209ENST00000590035 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
RETREG3-209ENST00000590035 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
RETREG3-209ENST00000590035 SLC15A5A6NIM6 579 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 GOLIM4O00461 696 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 SOX1O00570 391 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-209ENST00000590035 CYP2D6P10635 497 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms