RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CEP95Q96GE4 821 aa17.87■□□□□ 0.45
ATG4D-211ENST00000589753 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
ATG4D-211ENST00000589753 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-211ENST00000589753 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-211ENST00000589753 ERICH2A1L162 156 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 IFIT3O14879 490 aaKnown RBP17.86■□□□□ 0.45
ATG4D-211ENST00000589753 HUNKP57058 714 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 ICA1Q05084 483 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 CLEC10AQ8IUN9 316 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 CLMNQ96JQ2 1002 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 TCEANC2Q96MN5 208 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 TNKSO95271 1327 aa17.86■□□□□ 0.45
ATG4D-211ENST00000589753 NEK4P51957 841 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 RABEP1Q15276 862 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 TMEM67Q5HYA8 995 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 DGKHQ86XP1 1220 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-211ENST00000589753 SLC10A4Q96EP9 437 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 TTC14Q96N46 770 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 LRRC2Q9BYS8 371 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 AS3MTQ9HBK9 375 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 PDRG1Q9NUG6 133 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 TLL2Q9Y6L7 1015 aa17.85■□□□□ 0.45
ATG4D-211ENST00000589753 SH2B2O14492 632 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-211ENST00000589753 TTLL1O95922 423 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 EEF2P13639 858 aaKnown RBP17.84■□□□□ 0.45
ATG4D-211ENST00000589753 NOVP48745 357 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 FGD1P98174 961 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 ATP2B2Q01814 1243 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 WTAPQ15007 396 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 SEC23AQ15436 765 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 Q6ZUG5 572 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 SAPCD2Q86UD0 394 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-211ENST00000589753 ERO1BQ86YB8 467 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 IGDCC4Q8TDY8 1250 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 TBC1D2Q9BYX2 928 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 ARHGEF10LQ9HCE6 1279 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 CLIP2Q9UDT6 1046 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 ZHX2Q9Y6X8 837 aa17.84■□□□□ 0.45
ATG4D-211ENST00000589753 SPDYE5A6NIY4 337 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 APLP1P51693 650 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 PPATQ06203 517 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 IFIT1BQ5T764 474 aaKnown RBP17.83■□□□□ 0.44
ATG4D-211ENST00000589753 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 SIAH1Q8IUQ4 282 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 WDR18Q9BV38 432 aa17.83■□□□□ 0.44
ATG4D-211ENST00000589753 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
ATG4D-211ENST00000589753 TOP1P11387 765 aaKnown RBP17.82■□□□□ 0.44
ATG4D-211ENST00000589753 LIFRP42702 1097 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 TMTC2Q8N394 836 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 FBXL16Q8N461 479 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 IL27Q8NEV9 243 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 OPTNQ96CV9 577 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 ALDH8A1Q9H2A2 487 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-211ENST00000589753 SH2D4AQ9H788 454 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 LY9Q9HBG7 655 aa17.82■□□□□ 0.44
ATG4D-211ENST00000589753 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-211ENST00000589753 ECE1P42892 770 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 SPP2Q13103 211 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 ACER1Q8TDN7 264 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 MKL1Q969V6 931 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 FEZ1Q99689 392 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 CREBZFQ9NS37 354 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 AFG3L2Q9Y4W6 797 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 PHIPQ8WWQ0 1821 aa17.81■□□□□ 0.44
ATG4D-211ENST00000589753 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 ST18O60284 1047 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 ZNF157P51786 506 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-211ENST00000589753 PPIL2Q13356 520 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-211ENST00000589753 RGMBQ6NW40 437 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
ATG4D-211ENST00000589753 BRF1Q92994 677 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 WNK4Q96J92 1243 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 HHIPL1Q96JK4 782 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 SYNPO2Q9UMS6 1093 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
ATG4D-211ENST00000589753 MYH4Q9Y623 1939 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 USP17L10C9JJH3 530 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 IRF6O14896 467 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 AK2P54819 239 aa17.79■□□□□ 0.44
ATG4D-211ENST00000589753 ANKRD1Q15327 319 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms