RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 ZNF277Q9NRM2 450 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-219ENST00000589349 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-219ENST00000589349 TRMT112Q9UI30 125 aaKnown RBP10.57□□□□□ -0.72
DNMT1-219ENST00000589349 KIAA1551Q9HCM1 1747 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 HCLS1P14317 486 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-219ENST00000589349 CCINQ13939 588 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 OLFM4Q6UX06 510 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 RTKN2Q8IZC4 609 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 GTF3C2Q8WUA4 911 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-219ENST00000589349 HYPKQ9NX55 129 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 KDM3BQ7LBC6 1761 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 UBN2Q6ZU65 1347 aa10.56□□□□□ -0.72
DNMT1-219ENST00000589349 OPLAHO14841 1288 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 VEGFAP15692 232 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-219ENST00000589349 HSPA6P17066 643 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 SCNN1AP37088 669 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 MARSP56192 900 aaKnown RBP10.55□□□□□ -0.72
DNMT1-219ENST00000589349 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 ZNF34Q8IZ26 560 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 BHMTQ93088 406 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 TSR2Q969E8 191 aaKnown RBP10.55□□□□□ -0.72
DNMT1-219ENST00000589349 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 KLF15Q9UIH9 416 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 NRXN2Q9P2S2 1712 aa10.55□□□□□ -0.72
DNMT1-219ENST00000589349 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 NTSR2O95665 410 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 HOXB7P09629 217 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 C1orf229Q6ZS94 237 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-219ENST00000589349 DDX46Q7L014 1031 aaKnown RBP10.54□□□□□ -0.72
DNMT1-219ENST00000589349 RAB44Q7Z6P3 723 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-219ENST00000589349 NLRP10Q86W26 655 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 RGL4Q8IZJ4 473 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 PLBD2Q8NHP8 589 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 JDP2Q8WYK2 163 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 STK31Q9BXU1 1019 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 CHMP4AQ9BY43 222 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 SH3TC1Q8TE82 1336 aa10.54□□□□□ -0.72
DNMT1-219ENST00000589349 BRCA1P38398 1863 aaKnown RBP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 AMPD1P23109 780 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 ZAP70P43403 619 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 PRELPP51888 382 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 C8orf58Q8NAV2 365 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 PIK3R5Q8WYR1 880 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 TNFRSF25Q93038 417 aa10.53□□□□□ -0.72
DNMT1-219ENST00000589349 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-219ENST00000589349 ELOA3CA0A087WX78 387 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ELOA3DA6NLF2 546 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 SHISA8B8ZZ34 492 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ALAS2P22557 587 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 GRNP28799 593 aaKnown RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ELOA3BQ3SY89 546 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ELOA3Q8NG57 546 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 FAM89AQ96GI7 184 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 MYD88Q99836 296 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.73
DNMT1-219ENST00000589349 ANKRD31Q8N7Z5 1873 aa10.52□□□□□ -0.73
DNMT1-219ENST00000589349 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 KLRG2A4D1S0 409 aaPredicted RBP10.51□□□□□ -0.73
DNMT1-219ENST00000589349 NFKB1P19838 968 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 IARSP41252 1262 aaKnown RBP10.51□□□□□ -0.73
DNMT1-219ENST00000589349 EIF6P56537 245 aaKnown RBP10.51□□□□□ -0.73
DNMT1-219ENST00000589349 FAM26DQ5JW98 314 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 PODNQ7Z5L7 613 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
DNMT1-219ENST00000589349 SCARF2Q96GP6 870 aaPredicted RBP10.51□□□□□ -0.73
DNMT1-219ENST00000589349 CRAMP1Q96RY5 1269 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
DNMT1-219ENST00000589349 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-219ENST00000589349 PPIP5K2O43314 1243 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 XYLBO75191 536 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 EGFRP00533 1210 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 ZNF853P0CG23 659 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 NEXNQ0ZGT2 675 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 FSTL1Q12841 308 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 TWISTNBQ3B726 338 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-219ENST00000589349 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 ALKBH2Q6NS38 261 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 DPP8Q6V1X1 898 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-219ENST00000589349 LRP10Q7Z4F1 713 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 NIM1KQ8IY84 436 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 TSPYL6Q8N831 410 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms