RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TRIM47Q96LD4 638 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 ZSCAN10Q96SZ4 725 aaPredicted RBP7.15□□□□□ -1.26
LINC01539-202ENST00000589293 ZIC5Q96T25 663 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 SEC31BQ9NQW1 1179 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 IFT57Q9NWB7 429 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 MYO3BQ8WXR4 1341 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
LINC01539-202ENST00000589293 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.27
LINC01539-202ENST00000589293 FAM155AB1AL88 458 aaPredicted RBP7.14□□□□□ -1.27
LINC01539-202ENST00000589293 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 EGFRP00533 1210 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 RHOQP17081 205 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 MMP14P50281 582 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF280AP59817 542 aaPredicted RBP7.14□□□□□ -1.27
LINC01539-202ENST00000589293 FKBP5Q13451 457 aaPredicted RBP7.14□□□□□ -1.27
LINC01539-202ENST00000589293 C4orf17Q53FE4 359 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 DLK2Q6UY11 383 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 RASAL3Q86YV0 1011 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 RTL9Q8NET4 1388 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 CSRNP1Q96S65 589 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 MPHOSPH8Q99549 860 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 HINFPQ9BQA5 517 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 MBIPQ9NS73 344 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
LINC01539-202ENST00000589293 LRRC37AA6NMS7 1700 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 DUOX1Q9NRD9 1551 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 UBE2Q2LH0YL09 131 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 MYO1BO43795 1136 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 CTSWP56202 376 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 POU4F2Q12837 409 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 APOBEC3FQ8IUX4 373 aaKnown RBP7.13□□□□□ -1.27
LINC01539-202ENST00000589293 SCG3Q8WXD2 468 aaKnown RBP7.13□□□□□ -1.27
LINC01539-202ENST00000589293 METTL22Q9BUU2 404 aaPredicted RBP7.13□□□□□ -1.27
LINC01539-202ENST00000589293 ANKRD2Q9GZV1 360 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 COA1Q9GZY4 146 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 PHAXQ9H814 394 aaKnown RBP7.13□□□□□ -1.27
LINC01539-202ENST00000589293 CXXC1Q9P0U4 656 aaPredicted RBP7.13□□□□□ -1.27
LINC01539-202ENST00000589293 MAP3K2Q9Y2U5 619 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 AKAP11Q9UKA4 1901 aa7.13□□□□□ -1.27
LINC01539-202ENST00000589293 MED23Q9ULK4 1368 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 EML1O00423 815 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 APAF1O14727 1248 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 TBC1D8O95759 1140 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 IGFBP4P22692 258 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 CCT4P50991 539 aaKnown RBP7.12□□□□□ -1.27
LINC01539-202ENST00000589293 PRKG1Q13976 671 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 STRIP1Q5VSL9 837 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 OTUD7BQ6GQQ9 843 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 KSR2Q6VAB6 950 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 RHBDD1Q8TEB9 315 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 JARID2Q92833 1246 aaPredicted RBP7.12□□□□□ -1.27
LINC01539-202ENST00000589293 TRAIPQ9BWF2 469 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 MYH16Q9H6N6 1097 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 BSDC1Q9NW68 430 aaPredicted RBP7.12□□□□□ -1.27
LINC01539-202ENST00000589293 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
LINC01539-202ENST00000589293 TAF1P21675 1872 aa7.12□□□□□ -1.27
LINC01539-202ENST00000589293 ASTN2O75129 1339 aaPredicted RBP7.11□□□□□ -1.27
LINC01539-202ENST00000589293 PI4KAP2A4QPH2 592 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 PPP1R12BO60237 982 aaPredicted RBP7.11□□□□□ -1.27
LINC01539-202ENST00000589293 FKTNO75072 461 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 PHKA2P46019 1235 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 DLGAP5Q15398 846 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 TAF7LQ5H9L4 462 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 TTLL5Q6EMB2 1281 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 HOMEZQ8IX15 550 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 PI4KAP1Q8N8J0 262 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF296Q8WUU4 475 aaPredicted RBP7.11□□□□□ -1.27
LINC01539-202ENST00000589293 C2orf49Q9BVC5 232 aaPredicted RBP7.11□□□□□ -1.27
LINC01539-202ENST00000589293 MINPP1Q9UNW1 487 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 CHMP3Q9Y3E7 222 aa7.11□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF609O15014 1411 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF804BA4D1E1 1349 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ANKRD18BA2A2Z9 1011 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 MANSC4A6NHS7 340 aaPredicted RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 GPR25O00155 361 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 WNT10BO00744 389 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 WDHD1O75717 1129 aaPredicted RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 SASH1O94885 1247 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ATP4AP20648 1035 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 TXLNAP40222 546 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 RBM5P52756 815 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 INHBEP58166 350 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ARHGEF6Q15052 776 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 TEAD4Q15561 434 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 SUPT20HL1Q3ZLR7 823 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 PRAMEF18Q5VWM3 479 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 FBXO46Q6PJ61 603 aaPredicted RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 TAS1R3Q7RTX0 852 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF804AQ7Z570 1209 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 TTLL11Q8NHH1 800 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 GCC1Q96CN9 775 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms