RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 RNF34Q969K3 372 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 TJP2Q9UDY2 1190 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 CYP8B1Q9UNU6 501 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 RAXQ9Y2V3 346 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 FRMPD1Q5SYB0 1578 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 K7ELQ4 463 aaPredicted RBP4.72□□□□□ -1.65
ZNF540-207ENST00000589285 TRIM37O94972 964 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 ST13P50502 369 aaKnown RBP4.72□□□□□ -1.65
ZNF540-207ENST00000589285 SLBPQ14493 270 aaKnown RBP eCLIP4.72□□□□□ -1.65
ZNF540-207ENST00000589285 CDH24Q86UP0 819 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 REV1Q9UBZ9 1251 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 NCOA2Q15596 1464 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 WDR7Q9Y4E6 1490 aa4.72□□□□□ -1.65
ZNF540-207ENST00000589285 LRRN2O75325 713 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 TSPY4P0CV99 314 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 TSPY10P0CW01 314 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 TCF3P15923 654 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 ZYXQ15942 572 aaKnown RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 GGT6Q6P531 493 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 SEZ6L2Q6UXD5 910 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 FAM196AQ6ZSG2 479 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 DDX54Q8TDD1 881 aaKnown RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 DDX41Q9UJV9 622 aaKnown RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 PCDHB14Q9Y5E9 798 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 CILPO75339 1184 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 SLITRK5O94991 958 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 IGHA1P01876 353 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 FSTP19883 344 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 PLD6Q8N2A8 252 aaKnown RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 HEXIM2Q96MH2 286 aaKnown RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 MIPEPQ99797 713 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 DUSP23Q9BVJ7 150 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 LGR4Q9BXB1 951 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 PRDM7Q9NQW5 492 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 EFR3BQ9Y2G0 817 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 ARID4BQ4LE39 1312 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-207ENST00000589285 TIAM1Q13009 1591 aa4.71□□□□□ -1.66
ZNF540-207ENST00000589285 SCAMP3O14828 347 aaKnown RBP4.7□□□□□ -1.66
ZNF540-207ENST00000589285 HTR3BO95264 441 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 CNGB1Q14028 1251 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-207ENST00000589285 ZNF574Q6ZN55 896 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-207ENST00000589285 CYFIP1Q7L576 1253 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 ZDHHC13Q8IUH4 622 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 RNF214Q8ND24 703 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 PSMG3-AS1Q96PY0 264 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 RAPGEF6Q8TEU7 1601 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 FYCO1Q9BQS8 1478 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 AGLP35573 1532 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 ERCC5P28715 1186 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-207ENST00000589285 FAM169BQ8N8A8 192 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 SIN3AQ96ST3 1273 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 GINM1Q9NU53 330 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 PCDHB10Q9UN67 800 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 KIF14Q15058 1648 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 BPNT1O95861 308 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 ERVK-24P63145 666 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 HIRIP3Q9BW71 556 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-207ENST00000589285 KRT82Q9NSB4 513 aa4.7□□□□□ -1.66
ZNF540-207ENST00000589285 FER1L4A9Z1Z3 1794 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 CD109Q6YHK3 1445 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 ADGRL1O94910 1474 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 ZNF142P52746 1687 aaPredicted RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 LRRIQ1Q96JM4 1722 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 LMNB2Q03252 620 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 SNW1Q13573 536 aaKnown RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 TDRD10Q5VZ19 366 aaKnown RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 KIAA0825Q8IV33 1275 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 GREM1O60565 184 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 RPL6Q02878 288 aaKnown RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 BNIP3Q12983 259 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 EFCAB2Q5VUJ9 269 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 CDKAL1Q5VV42 579 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 RNF43Q68DV7 783 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 HDXQ7Z353 690 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 ZAR1Q86SH2 424 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
ZNF540-207ENST00000589285 FAM83CQ9BQN1 747 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 RSRP1Q9BUV0 290 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 CCDC18Q5T9S5 1454 aa4.69□□□□□ -1.66
ZNF540-207ENST00000589285 ARSHQ5FYA8 562 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 FRMD6Q96NE9 622 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 EMILIN2Q9BXX0 1053 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 CAPN10Q9HC96 672 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 KDM5CP41229 1560 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 HECW1Q76N89 1606 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 TROQ12816 1431 aaPredicted RBP4.68□□□□□ -1.66
ZNF540-207ENST00000589285 E9PSI1 815 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 LRRC14Q15048 493 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 ATXN3LQ9H3M9 355 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 GSX1Q9H4S2 264 aaPredicted RBP4.68□□□□□ -1.66
ZNF540-207ENST00000589285 SAMM50Q9Y512 469 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 SUPT16HQ9Y5B9 1047 aaKnown RBP4.68□□□□□ -1.66
ZNF540-207ENST00000589285 FGD6Q6ZV73 1430 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 SCO2A0A1W2PP80 73 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 PRR19A6NJB7 356 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 RGL3Q3MIN7 710 aa4.68□□□□□ -1.66
ZNF540-207ENST00000589285 ZMYM1Q5SVZ6 1142 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms