RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 CYP2D7A0A087X1C5 515 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 GSG1L2A8MUP6 293 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 IGHDP01880 384 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 CDK8P49336 464 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 SBK1Q52WX2 424 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 C16orf86Q6ZW13 317 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 RAET1EQ8TD07 263 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 EVI5LQ96CN4 794 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 P2RX7Q99572 595 aaKnown RBP23.04■■□□□ 1.28
CIRBP-221ENST00000589161 MYPNQ86TC9 1320 aa23.04■■□□□ 1.28
CIRBP-221ENST00000589161 M0R2C6 588 aa23.03■■□□□ 1.28
CIRBP-221ENST00000589161 ZYXQ15942 572 aaKnown RBP23.03■■□□□ 1.28
CIRBP-221ENST00000589161 B4GALNT3Q6L9W6 998 aa23.03■■□□□ 1.28
CIRBP-221ENST00000589161 ACER1Q8TDN7 264 aa23.03■■□□□ 1.28
CIRBP-221ENST00000589161 GTF3C2Q8WUA4 911 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-221ENST00000589161 LNPKQ9C0E8 428 aa23.03■■□□□ 1.28
CIRBP-221ENST00000589161 PATL2C9JE40 543 aaKnown RBP23.02■■□□□ 1.28
CIRBP-221ENST00000589161 TNPO2O14787 897 aaKnown RBP23.02■■□□□ 1.28
CIRBP-221ENST00000589161 APPP05067 770 aa23.02■■□□□ 1.28
CIRBP-221ENST00000589161 ZMYM1Q5SVZ6 1142 aa23.02■■□□□ 1.28
CIRBP-221ENST00000589161 ZNF333Q96JL9 665 aa23.02■■□□□ 1.28
CIRBP-221ENST00000589161 USP17L15C9J2P7 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L13C9JLJ4 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L11C9JVI0 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L18D6R9N7 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L22D6RA61 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L17D6RBQ6 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L19D6RCP7 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L20D6RJB6 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 HERVK_113P62684 666 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 USP17L24Q0WX57 530 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 CHD1LQ86WJ1 897 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 TICAM2Q86XR7 235 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 COA7Q96BR5 231 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 MORF4L1Q9UBU8 362 aa23.01■■□□□ 1.27
CIRBP-221ENST00000589161 SMIM22K7EJ46 135 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 AKR1B1P15121 316 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 TDO2P48775 406 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 NUCB1Q02818 461 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 PRKCZQ05513 592 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 TMEM106CQ9BVX2 250 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 NACAP1Q9BZK3 213 aa23■■□□□ 1.27
CIRBP-221ENST00000589161 MINDY4BA8MYZ0 360 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 VCAM1P19320 739 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 GRK4P32298 578 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 CATSPERGQ6ZRH7 1159 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 GPRC5AQ8NFJ5 357 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 SH3TC2Q8TF17 1288 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 SEC62Q99442 399 aaKnown RBP22.99■■□□□ 1.27
CIRBP-221ENST00000589161 ARHGEF10LQ9HCE6 1279 aa22.99■■□□□ 1.27
CIRBP-221ENST00000589161 A0A1W2PRG0 241 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 ICA1Q05084 483 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 IFNL3Q8IZI9 196 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 SH2D4AQ9H788 454 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 MKNK2Q9HBH9 465 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 ZNF287Q9HBT7 754 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 GABRQQ9UN88 632 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 ZSWIM8A7E2V4 1837 aa22.98■■□□□ 1.27
CIRBP-221ENST00000589161 HTTP42858 3142 aa22.97■■□□□ 1.27
CIRBP-221ENST00000589161 FLT3LGP49771 235 aa22.97■■□□□ 1.27
CIRBP-221ENST00000589161 KANSL2Q9H9L4 492 aa22.97■■□□□ 1.27
CIRBP-221ENST00000589161 EPB41L4AQ9HCS5 686 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-221ENST00000589161 RBPJLQ9UBG7 517 aa22.97■■□□□ 1.27
CIRBP-221ENST00000589161 BAZ2AQ9UIF9 1905 aaKnown RBP22.97■■□□□ 1.27
CIRBP-221ENST00000589161 IRF5Q13568 498 aa22.96■■□□□ 1.27
CIRBP-221ENST00000589161 SLAIN1Q8ND83 568 aa22.96■■□□□ 1.27
CIRBP-221ENST00000589161 RPAP3Q9H6T3 665 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-221ENST00000589161 TXNRD2Q9NNW7 524 aa22.96■■□□□ 1.27
CIRBP-221ENST00000589161 TMX2Q9Y320 296 aa22.96■■□□□ 1.27
CIRBP-221ENST00000589161 POTEFA5A3E0 1075 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 TRIM6-TRIM34B2RNG4 842 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 SIAH1Q8IUQ4 282 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 PLEKHM2Q8IWE5 1019 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 PXYLP1Q8TE99 480 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 LPAR1Q92633 364 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 ROBO3Q96MS0 1386 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 NAPBQ9H115 298 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 OSBPL3Q9H4L5 887 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 HELLSQ9NRZ9 838 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 BIN2Q9UBW5 565 aaPredicted RBP22.95■■□□□ 1.26
CIRBP-221ENST00000589161 RABGAP1Q9Y3P9 1069 aa22.95■■□□□ 1.26
CIRBP-221ENST00000589161 ADCY3O60266 1144 aa22.94■■□□□ 1.26
CIRBP-221ENST00000589161 ERVK-9P63128 1117 aa22.94■■□□□ 1.26
CIRBP-221ENST00000589161 ERVK-24P63145 666 aa22.94■■□□□ 1.26
CIRBP-221ENST00000589161 UBXN2AP68543 259 aa22.94■■□□□ 1.26
CIRBP-221ENST00000589161 CCAR1Q8IX12 1150 aaKnown RBP22.94■■□□□ 1.26
CIRBP-221ENST00000589161 PAGR1Q9BTK6 254 aa22.94■■□□□ 1.26
CIRBP-221ENST00000589161 MYCP01106 439 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-221ENST00000589161 SLC3A2P08195 630 aaKnown RBP22.93■■□□□ 1.26
CIRBP-221ENST00000589161 RASA1P20936 1047 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 MAPK4P31152 587 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 COG2Q14746 738 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 LBX2Q6XYB7 198 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 ZNF444Q8N0Y2 327 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-221ENST00000589161 STK11IPQ8N1F8 1099 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 VCPKMTQ9H867 229 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 HOXC10Q9NYD6 342 aa22.93■■□□□ 1.26
CIRBP-221ENST00000589161 EEF2P13639 858 aaKnown RBP22.92■■□□□ 1.26
CIRBP-221ENST00000589161 CCNA1P78396 465 aa22.92■■□□□ 1.26
CIRBP-221ENST00000589161 IRX6P78412 446 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms