RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 GPATCH2Q9NW75 528 aa6.04□□□□□ -1.44
SMAD4-207ENST00000589076 TACC3Q9Y6A5 838 aa6.04□□□□□ -1.44
SMAD4-207ENST00000589076 KRT1P04264 644 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 GRK4P32298 578 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 MFAP1P55081 439 aaKnown RBP6.03□□□□□ -1.44
SMAD4-207ENST00000589076 LINC00310P59036 64 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 PDE4BQ07343 736 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 TNK2Q07912 1038 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 TTBK2Q6IQ55 1244 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 CDH24Q86UP0 819 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 RIN3Q8TB24 985 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
SMAD4-207ENST00000589076 FRMD6Q96NE9 622 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 C12orf49Q9H741 205 aa6.03□□□□□ -1.44
SMAD4-207ENST00000589076 DNAJC25-GNG10A0A024R161 153 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 HPXP02790 462 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 USP17L7P0C7H9 530 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 SRFP11831 508 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 CCDC27Q2M243 656 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 RALGPS1Q5JS13 557 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 RASIP1Q5U651 963 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 LILRA2Q8N149 483 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.45
SMAD4-207ENST00000589076 CNTNAP4Q9C0A0 1308 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 PGRP06401 933 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 TPP2P29144 1249 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-207ENST00000589076 RPS26P62854 115 aaKnown RBP6.01□□□□□ -1.45
SMAD4-207ENST00000589076 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 TMEM132EQ6IEE7 984 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 IRF2BP1Q8IU81 584 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 PDZD8Q8NEN9 1154 aa6.01□□□□□ -1.45
SMAD4-207ENST00000589076 FITM1A5D6W6 292 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 ESR1P03372 595 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 PTPN11Q06124 597 aaPredicted RBP6□□□□□ -1.45
SMAD4-207ENST00000589076 SPPL2CQ8IUH8 684 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 MRPL41Q8IXM3 137 aaKnown RBP6□□□□□ -1.45
SMAD4-207ENST00000589076 GAL3ST3Q96A11 431 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 IRF2BPLQ9H1B7 796 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 ADAMTS10Q9H324 1103 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 CWC22Q9HCG8 908 aaKnown RBP6□□□□□ -1.45
SMAD4-207ENST00000589076 DUSP13Q9UII6 198 aa6□□□□□ -1.45
SMAD4-207ENST00000589076 RFXAPO00287 272 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 SEMA7AO75326 666 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 LTKP29376 864 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 ERVFC1P60507 584 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 FMR1Q06787 632 aaKnown RBP eCLIP5.99□□□□□ -1.457e-8■■■□□ 16.8
SMAD4-207ENST00000589076 EGR3Q06889 387 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 CCDC85BQ15834 202 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-207ENST00000589076 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-207ENST00000589076 ZCCHC4Q9H5U6 513 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 KCNK12Q9HB15 430 aa5.99□□□□□ -1.45
SMAD4-207ENST00000589076 BUD31P41223 144 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-207ENST00000589076 ZNF385BQ569K4 471 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 TMEM151BQ8IW70 566 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 RGS22Q8NE09 1264 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 RELTQ969Z4 430 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 TMEM87BQ96K49 555 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 RNF32Q9H0A6 362 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 MIR1-1HGQ9H1L0 117 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 CEP131Q9UPN4 1083 aa5.98□□□□□ -1.45
SMAD4-207ENST00000589076 PEX10O60683 326 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 ERCC3P19447 782 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 EIF4BP23588 611 aaKnown RBP5.97□□□□□ -1.45
SMAD4-207ENST00000589076 PDE6BP35913 854 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 CHRNEQ04844 493 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 DUSP4Q13115 394 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 ZNF605Q86T29 641 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 BAHD1Q8TBE0 780 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-207ENST00000589076 ASB16Q96NS5 453 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 DPH2Q9BQC3 489 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-207ENST00000589076 PARD6AQ9NPB6 346 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 TJP2Q9UDY2 1190 aa5.97□□□□□ -1.45
SMAD4-207ENST00000589076 CNOT6Q9ULM6 557 aaKnown RBP5.97□□□□□ -1.45
SMAD4-207ENST00000589076 GFRA2O00451 464 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 RLBP1P12271 317 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 HOXA5P20719 270 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 CHMP4BP1P59074 171 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 DLG4P78352 724 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 SEPT6Q14141 434 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 SNX17Q15036 470 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 TSNAXIP1Q2TAA8 658 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 TCERG1LQ5VWI1 586 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 MCATQ8IVS2 390 aaKnown RBP5.96□□□□□ -1.46
SMAD4-207ENST00000589076 GPR62Q9BZJ7 368 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 DUSP15Q9H1R2 295 aaPredicted RBP5.96□□□□□ -1.46
SMAD4-207ENST00000589076 ADAM30Q9UKF2 790 aa5.96□□□□□ -1.46
SMAD4-207ENST00000589076 LDHBP07195 334 aaKnown RBP5.95□□□□□ -1.46
SMAD4-207ENST00000589076 BMP7P18075 431 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 TRHRP34981 398 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-207ENST00000589076 CDK8P49336 464 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 YARSP54577 528 aaKnown RBP5.95□□□□□ -1.46
SMAD4-207ENST00000589076 NR0B2Q15466 257 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 GAB4Q2WGN9 574 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 ERICH6BQ5W0A0 696 aa5.95□□□□□ -1.46
SMAD4-207ENST00000589076 TSPYL5Q86VY4 417 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-207ENST00000589076 C19orf44Q9H6X5 657 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms