RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 WDR18Q9BV38 432 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 USP26Q9BXU7 913 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 TBC1D2Q9BYX2 928 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 LOC285556D6RIA3 1793 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 ICA1Q05084 483 aa22.43■■□□□ 1.18
CLPTM1-209ENST00000588855 RNF20Q5VTR2 975 aa22.43■■□□□ 1.18
CLPTM1-209ENST00000588855 ACER1Q8TDN7 264 aa22.43■■□□□ 1.18
CLPTM1-209ENST00000588855 ESR2Q92731 530 aa22.43■■□□□ 1.18
CLPTM1-209ENST00000588855 MS4A4AQ96JQ5 239 aa22.43■■□□□ 1.18
CLPTM1-209ENST00000588855 EPB41L2O43491 1005 aaKnown RBP22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 KDM4AO75164 1064 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 HSPA4P34932 840 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 RASEFQ8IZ41 740 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 KRT23Q9C075 422 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 CNNM2Q9H8M5 875 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 KANSL2Q9H9L4 492 aa22.42■■□□□ 1.18
CLPTM1-209ENST00000588855 CXCL11O14625 94 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 NMT2O60551 498 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 GTF2A2P52657 109 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 SNAPC2Q13487 334 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 DGKZQ13574 1117 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 MTMR2Q13614 643 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 SIAH1Q8IUQ4 282 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 CEP95Q96GE4 821 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 A0A0G2JLL6 359 aaPredicted RBP22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 A0A1W2PRG0 241 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 MANSC4A6NHS7 340 aaPredicted RBP22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 EEF2P13639 858 aaKnown RBP22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 MAP2K2P36507 400 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 TRDNQ13061 729 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 PRRT2Q7Z6L0 340 aaPredicted RBP22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 FEZ1Q99689 392 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 IL17RBQ9NRM6 502 aa22.41■■□□□ 1.18
CLPTM1-209ENST00000588855 CCL15-CCL14A0A0B4J2E2 113 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 USP17L10C9JJH3 530 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 ATP2B2Q01814 1243 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 ZYXQ15942 572 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 CCL15Q16663 113 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 RALYLQ86SE5 291 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 NCOA7Q8NI08 942 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 BRI3BPQ8WY22 251 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 KCNB2Q92953 911 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 MTMR4Q9NYA4 1195 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 ZSWIM5Q9P217 1185 aa22.4■■□□□ 1.18
CLPTM1-209ENST00000588855 ZKSCAN1P17029 563 aaPredicted RBP22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 NT5C2P49902 561 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 HMGCS2P54868 508 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 BACE1P56817 501 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 MOGSQ13724 837 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 CYB5R4Q7L1T6 521 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 ZKSCAN3Q9BRR0 538 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 ARHGEF10LQ9HCE6 1279 aa22.39■■□□□ 1.17
CLPTM1-209ENST00000588855 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 CETPP11597 493 aa22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 SREBF2Q12772 1141 aa22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 COL9A3Q14050 684 aaPredicted RBP22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 TSGA10IPQ3SY00 556 aa22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 MB21D2Q8IYB1 491 aaPredicted RBP22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 NYAP2Q9P242 653 aa22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 SNX14Q9Y5W7 946 aa22.38■■□□□ 1.17
CLPTM1-209ENST00000588855 TESPA1A2RU30 521 aaPredicted RBP22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 SH3D19Q5HYK7 790 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 GADL1Q6ZQY3 521 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 PTPN18Q99952 460 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 KIAA1683Q9H0B3 1180 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 TCP11L1Q9NUJ3 509 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 CLIP2Q9UDT6 1046 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 STX8Q9UNK0 236 aa22.37■■□□□ 1.17
CLPTM1-209ENST00000588855 IGF2BP3O00425 579 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 TTLL1O95922 423 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 MCCP23508 829 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 ADCK5Q3MIX3 580 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 TMX2Q9Y320 296 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 TM4SF4P48230 202 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 NOVP48745 357 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 USP17L2Q6R6M4 530 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 IQCA1Q86XH1 822 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 SH2D4AQ9H788 454 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 EMILIN3Q9NT22 766 aa22.36■■□□□ 1.17
CLPTM1-209ENST00000588855 TNKSO95271 1327 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 USP14P54578 494 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 INHBEP58166 350 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 ANTXR2P58335 489 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 KRT32Q14532 448 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 RCSD1Q6JBY9 416 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 CHST3Q7LGC8 479 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 REM2Q8IYK8 340 aaPredicted RBP22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 LRRC47Q8N1G4 583 aaKnown RBP22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 TMOD4Q9NZQ9 345 aa22.35■■□□□ 1.17
CLPTM1-209ENST00000588855 BTBD19C9JJ37 291 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 KIAA1755Q5JYT7 1200 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 PPP4R3BQ5MIZ7 849 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 TREML2Q5T2D2 321 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 FASTKD5Q7L8L6 764 aaKnown RBP22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 IFNL1Q8IU54 200 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 FAM43AQ8N2R8 423 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 PROCA1Q8NCQ7 364 aaPredicted RBP22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 MKL1Q969V6 931 aa22.34■■□□□ 1.17
CLPTM1-209ENST00000588855 NEK1Q96PY6 1258 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms